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A phylum-level phylogenetic classification of zygomycete fungi based on genome-scale data
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Sequencing and functional validation of the JGI Brachypodium distachyon T‐DNA collection
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IMG/M: the integrated metagenome data management and comparative analysis system
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A k-mer-based approach for phylogenetic classification of taxa in environmental genomic data.
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Natural Prodcast Episode 7: Ben Shen
… think his energy is infectious. DAN: I’ll say up front that JGI recently started collaborating with Ben and his group to … so everybody, readers of the library, can come to our databases and look for the specific information they are … the genomics, with the bioinformatics and with the bigger data, another area I see a great potential will be machine …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
New 5-year strategic plan outlines how the JGI will advance the bioeconomy, leveraging partnerships to … a vast range of organisms and ecosystems. These kinds of data could open opportunities along multiple avenues, … community with advanced genomic capabilities, large scale data, and professional expertise while responsibly managing …
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Nigel Mouncey
… and today, focuses on continuing to build and position JGI as a leading integrative genome science user facility. … is also on the Leadership Team of the National Microbiome Data Collaborative and served as President of the Society … of solvent-producing Clostridium species. Scientific Data. 11 Hahnke, R. L. et al. 2022. Expanding the Genomic …
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Genome‐wide associations with flowering time in switchgrass using exome‐capture sequencing data
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The BioMart community portal: an innovative alternative to large, centralized data repositories
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Nontargeted virus sequence discovery pipeline and virus clustering for metagenomic data
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Combining Hadoop with MPI to Solve Metagenomics Problems that are both Data- and Compute-intensive
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iVirus 2.0: Cyberinfrastructure-supported tools and data to power DNA virus ecology
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