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Identification of a gene encoding the last step of the L-rhamnose catabolic pathway in Aspergillus niger revealed the inducer of the pathway regulator
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The Genomes OnLine Database (GOLD) v.5: a metadata management system based on a four level (meta)genome project classification
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… planet’s microbial diversity is immense, yet much of it remains unknown. For more than a decade, researchers around the … have been generated using techniques that the JGI has pioneered, including single-cell genomics and metagenomics. … of genomic DNA at DSMZ for GEBA-Actino and similar projects.       … The U.S. Department of Energy Joint Genome …
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A novel open-source cultivation system helps establish the first full cycle chemosynthetic symbiosis model system involving the giant ciliate Zoothamnium niveum
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Ray Turner Completes Last Tour of Lab Duty at JGI
For the last 15 years, Ray Turner has been one constant for the Joint Genome Institute. On July 1, 2020, that all changed. … the miles on a daily commute (over 100 roundtrip every day, conservatively estimated to be over 350,000 miles over …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both Earth and … to deal with hot and dry conditions could help us to one day develop plants that are more drought-tolerant. These …
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JGI Earth Month: Kjiersten Fagnan Reflects on Shelter-in-Place Effects
In   April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25.  On March 17, … at Lawrence Berkeley National Laboratory, is located in one of those counties. The shelter-in-place order has since …
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Genomes of ubiquitous marine and hypersaline Hydrogenovibrio, Thiomicrorhabdus and Thiomicrospira spp. encode a diversity of mechanisms to sustain chemolithoautotrophy in heterogeneous environments
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Secondary Metabolites Advisory Committee
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From Competition to Cooperation
Tracking evolution of symbiotic lifestyles across multiple fungal … able to carry out a broader analysis than had ever been done before to look at how multiple forest fungi have … JGI fungal portal  MycoCosm . The work builds upon several papers and workshops, starting with the first mycorrhizal …
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Fungal & Algal Program User Advisory Committee
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Olpidium, The Key to the Origin of Terrestrial Fungi
Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the … Igor Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … revealed that the branches among Olpidium and the first few splits in the non-flagellated terrestrial fungi …
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