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Streamlining Regulon Identification in Bacteria
RIViT-seq technology could speed up associating transcription factors with their target genes. The Science Regulons are … genes that can be turned on or off by the same regulatory protein. Researchers demonstrated the efficacy and potential … in Streptomyces coelicolor . The Impact As an integrative genome science user facility, connecting genes to functions …
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IMA genome-F18
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Crysten Blaby-Haas
Initiative, a partnership between JGI and the Molecular Foundry, a nanoscale research and knowledge-based user facility … expanding her experimental repertoire to include in vitro protein-based techniques, algae, and plants, while focusing … user capability between the JGI and Molecular Foundry for genome-encoded biomaterial discovery, design, and …
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JGI Interns at UC Merced Earn CAMP Merit Awards
As part of the ongoing partnership between DOE JGI and UC Merced to promote diversity and inclusion in science and research, two undergraduate students from … Alvarez, both California Alliance for Minority Participation (CAMP) students at UC Merced. CAMP is a statewide …
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Matthew Kellom
Matt is broadly interested in the interactions between microbial life and environment, and using … interest. Matt also supports various CSP and FICUS user projects for the Metagenome Program. …
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Neha Varghese
… bioinformatics software to enable analysis and interpretation of genomic and metagenomic data for JGI’s user community. She also provides support for user science and projects through implementation of advanced analysis pipelines and tools as well as …
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JGI Hosts GPU Hackathon in May
… high-performance computing resources, an upcoming hackathon led by the Oak Ridge Leadership Computing Facility … (OLCF), NVIDIA, and the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, aims to explore applications in the life sciences that can be ported to the GPU …
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The JGI announces FY25 awardees for our Community Science Program Annual Call
… for our 2025 Community Science Program Annual Call. These projects include cutting-edge research into microbial … mats — to reveal how these systems adapt and contribute to global biogeochemical cycles. Additional … Deputy Director of JGI’s User Programs. “Many of these projects are large in scale and involve multiple …
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Gene Expression: From On-Off Switch to Dial
Fine-tuning metabolic gene expression helps identify variants in yeast genes. The Science … researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is …
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New Lineages of Life Group
Our research is focused on the discovery and characterization of novel bacterial, … (2022) Giant virus biology and diversity in the era of genome-resolved metagenomics. Nature Reviews Microbiology … JC Villada, F Schulz (2022) The endosymbiotic box of protective tricks. Nature Reviews Microbiology 20 (5), …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
Puerto Nuevo is a small town along the Baja California coastline in Mexico. While conducting early field studies related to her thesis on cone snails, UC Merced graduate student Sabah Ul-Hasan …
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JGI announces 2024 New Investigator portfolio
That’s why each year we look for novel research projects — aligned with DOE missions and from PIs who have not led any previously-accepted …  resources, these researchers will dive into a range of projects spanning the resilience of desert grasslands to the …
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