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Rex Malmstrom
Dr. Malmstrom is a Staff Scientist and leader of the Microscale Applications group. Before joining the JGI … genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His group also handles the … dissertation in life sciences 2006 … Education … Selected Publications … Awards and Honors …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
In honor of the JGI's 25th anniversary in 2022, we have revisited a … Beginning in the early 2000s , these environmental metagenomes began to offer a window into viral existence. Along … the world, finding over 125,000 partial and complete viral genomes. That study multiplied the number of known viral …
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What Happens To a Rainforest When You Dial Up Drought?
Rainforests store a big fraction of all the carbon on Earth, and soil microbes play a key role in pulling that carbon out of the atmosphere. This episode, researchers take a look at …
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IMA genome-F18
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UC Merced Interns Reflect on Their JGI Summer Projects
Over the course of eight weeks this past summer, 10 students from UC Merced … on research projects that contribute to the larger mission of the U.S. Department of Energy. Students also worked with their mentors to …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist … Roux leads the Viral Genomics group within the JGI Metagenome Program, and coordinates the development of the virus …
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JGI announces second round of 2023 New Investigator awardees
… is eager to work and share our tools with a widening circle of researchers. That’s why twice each year we look for novel … under our Community Science Program .  Below find a list of the second round of researchers accepted for 2023. Proposals are accepted …
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EcoFAB 2025: Advancing Mechanistic Microbial Science Using Fabricated Ecosystems
… studies.  This conference is inspired by the vision of standardized fabricated ecosystems (EcoFABs) designed for precise manipulation and reproducible experimentation of microbiome dynamics. Together, we will explore …
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JGI announces 2024 New Investigator portfolio
… is eager to work and share our tools with a widening circle of researchers. That’s why each year we look for novel … under our Community Science Program . Below find a list of researchers whose proposals were accepted for 2024. … JGI’s  resources, these researchers will dive into a range of projects spanning the resilience of desert grasslands to …
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JGI Hosts GPU Hackathon in May
Computing Facility (OLCF), NVIDIA, and the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, aims to explore …
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Digging into Microbial Ecosystems Deep Underground
… “Microbes underpin so much of what we see on earth in terms of nutrient cycles and biogeochemical cycles…. Viruses play a pretty important role in the cycling of nutrients in these systems.” -Mike Wilkins, Colorado …
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Year in Review: JGI’s 2018 Progress Report Available Now
The latest edition of the JGI Progress Report highlights notable research and … scientific collaborations in 2018. The cover is an image of Mono Lake, a saline soda lake east of California’s Yosemite National Park, taken by JGI’s own …
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