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Genomic analysis of 94 SEMIA strains isolated from common bean nodules: species diversity and genes related to nodulation, nitrogen fixation, and tryptophan metabolism
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Fungus Fuels Tree Growth
… Researchers start pinning down how a fungal symbiont spurs … always found among and within poplar trees, and in an effort to understand its influence on the plant, a team of … partnered with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Rex Malmstrom
… Dr. Malmstrom is a Staff Scientist and leader of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever … genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His group also handles the … Ph.D. in Marine Biology/Biochemistry, University of Delaware BA in …
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UC Merced Interns Reflect on Their JGI Summer Projects
… Over the course of eight weeks this past summer, 10 students from UC Merced worked closely with JGI scientists on research projects that contribute to the larger mission of the … language processing techniques to categorize genetic information. Learn more about their work here in a series of …
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How Maize Makes An Antibiotic Cocktail
… Maize produces a family of compounds that protects it against … the team used a battery of techniques. They screened panels of hundreds of maize lines for genetic variation in … synthesized by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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JGI@25: Building a Better Bean
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … in soil health through nitrogen-fixation and holds clues for maximizing soybean, the common bean’s close relative, as … of the University of Georgia sequenced and analyzed the genome of the common bean. That work was published online …
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JGI Workshop at SIMB NP Meeting
… Jan. 7: New Capabilities to Study Secondary Metabolism   … often tedious and resource intensive. This is often due to, for example, tight regulation of biosynthetic gene clusters … a given BGC in various hosts, availability of sequenced genomes, and computing resources needed to predict BGCs from …
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What Happens Underground Influences Global Nutrient Cycles
… DOE user facilities EMSL and JGI announce FY 2020 collaborative FICUS … projects. Through the Facilities Integrating Collaborations for User Science (FICUS) program, two Department of Energy … Molecular Sciences Laboratory (EMSL) and the  DOE Joint Genome Institute (JGI)—have selected 11 proposals for …
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Nick Everson
… Mr. Everson rejoined the JGI in 2020  and leads all aspects of JGI Operations which include the … and logistics activities.  He returned to the Joint Genome Institute after serving as the Chief Operating … the DOE Joint Bioenergy Institute and the Operations Deputy for LBNL’s Biological Systems & Engineering Division. Prior …
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The genome of Polaromonas naphthalenivorans strain CJ2, isolated from coal tar‐contaminated sediment, reveals physiological and metabolic versatility and evolution through extensive horizontal gene transfer
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High-quality permanent draft genome sequence of Ensifer sp. PC2, isolated from a nitrogen-fixing root nodule of the legume tree (Khejri) native to the Thar Desert of India
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Conserved genomic collinearity as a source of broadly applicable, fast evolving, markers to resolve species complexes: A case study using the lichen-forming genus Peltigera section Polydactylon
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