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Filling in the Plant Tree of Life
… food, medicine, and bioenergy crops. But most available genomes are from narrow swaths of the plant tree of life. One project aims to change that. …
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JGI on the 2021 Highly Cited Researchers List
… in their chosen field or fields through the publication of multiple highly cited papers during the last decade.” … past year, through programs including the JGI-UC Merced Genomics Internship Program and the DOE Office of Science … of webinars featuring aspects of the Integrated Microbial Genomes & Microbiomes (IMG/M) Nikos Kyrpides was part of an …
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The molecular dimension of microbial species: 3. Comparative genomics of Synechococcus strains with different light responses and in situ diel transcription patterns of associated putative ecotypes in the Mushroom Spring microbial mat
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The complete mitochondrial genome of the conifer needle endophyte, Phialocephala scopiformis DAOMC 229536 confirms evolutionary division within the fungal Phialocephala fortinii s.l. – Acephala appalanata species complex
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Novel heavy metal resistance gene clusters are present in the genome of Cupriavidus neocaledonicus STM 6070, a new species of Mimosa pudica microsymbiont isolated from heavy-metal-rich mining site soil
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Whole Genome Analyses Suggests that Burkholderia sensu lato Contains Two Additional Novel Genera (Mycetohabitans gen. nov., and Trinickia gen. nov.): Implications for the Evolution of Diazotrophy and Nodulation in the Burkholderiaceae
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What Happens Underground Influences Global Nutrient Cycles
… for User Science (FICUS) program, two Department of Energy (DOE) Office of Science national user … alga  Chlamydomonas reinhardtii , one of the JGI’s Flagship genomes. She and her colleagues have generated a … omics and computational resources with JGI’s cutting-edge genomics, DNA synthesis and complementary capabilities. …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
In honor of the JGI's 25th anniversary in 2022, we have revisited a … in the journal Science. It detailed how they’d used metagenomics — a then-novel approach which allows scientists to … of rumen-digested switchgrass, researchers isolated and sequenced DNA from rumen microbes involved in the digestion …
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User Advisory Committees
All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to … on JGI Advisory Committees are outlined in this Code of Conduct. … The UEC represents the JGI user community and …
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How Filamentous Fungi Sense Food
… . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to … N. crassa is the model organism for filamentous fungi, all of which contain a wide array of plant cell-wall degrading … enriching the work being done as part of the 1000 Fungal Genomes Project. Funding for the project was also provided …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… tiny algae. The cold polar oceans give rise to some of the largest food webs on Earth. And at their base are … than previously suspected. “That would cause significant consequences on the entire food web, and therefore ecosystem … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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JGI-UC Merced Interns Share Their 2021 Experiences
During the summer of 2021, 13 interns from UC Merced spent eight weeks working … the goal of inspiring students to embark on a career in genomics and to help foster a diverse future workforce in … Evaluation of Binning Tools for Microbial Eukaryotes in Metagenomes … Functional exploration of Phage Impact on …
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