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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
Through the  “Facilities Integrating Collaborations for User Science” (FICUS) call between the JGI and the  … State University, which archives and makes available for research over 100,000 samples and specimens of over 60 … and guidelines. … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… back story — they rely on enzymes that have been evolving for billions of years. However, these enzymes are often … as well as the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … located at Berkeley Lab. In addition to providing metagenome mining for computational analysis of the AT enzyme …
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Crysten Blaby-Haas
… joint user capability between the JGI and Molecular Foundry for genome-encoded biomaterial discovery, design, and … Google Scholar … Education … Awards and Service … Selected Publications …
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Scaling Up Existing Skill Sets
… paired six UC Merced students with seven JGI researchers for bioinformatics internship opportunities in fields ranging from … Year: 3rd year undergraduate student Mentor: Zhong Wang, Genome Analysis What effect has your summer internship with …
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Krishna Palaniappan
Krishna is responsible for the design and maintenance of the Integrated Microbial Genomes (IMG) data warehouse, and integration of genomic and …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… challenges, characterizing viruses is a key step. For decades, though, many viruses have been somewhat … Beginning in the early 2000s , these environmental metagenomes began to offer a window into viral existence. Along … the world, finding over 125,000 partial and complete viral genomes. That study multiplied the number of known viral …
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JGI Workshops at PAG
… breadth of algal diversity, the numbers of sequenced algal genomes, and the quality of those genomes, is rising. The purpose of this Workshop is to … hear from researchers who are applying genomic sequence information to BER funded activities of plant systems. We will …
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Uri Neri
… computational biologist who spends his days wrangling viral genomes and occasionally remembering to document his code. At JGI, he develops tools for viral discovery and analysis, with a particular fondness for RNA viruses – though he'll take a look at anything …
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JGIota: A Tool to Find the Nomadic Genes that Help Microbes Adapt - geNomad
… software that finds plasmids and viruses within microbial genomes. As mobile genetic elements like viruses spread …
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Filling in the Plant Tree of Life
… food, medicine, and bioenergy crops. But most available genomes are from narrow swaths of the plant tree of life. …
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IMG/VR
… the latest release of IMG database dedicated to viral genomes assembled from metagenomes. He also demonstrates briefly how to leverage novel …
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MGM Workshop at Fisabio Summer School 2025
… and seminars as well as practical hands-on sessions in bioinformatics and biostatistics Several sessions will be devoted to training in the use of the Integrated Microbial Genomes & Microbiomes (IMG/M) system, presented by Natalia …
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