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Simon Roux
Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the development … learning framework to maximize host prediction for metagenome-derived viruses of archaea and bacteria. PLoS Biology …
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Alabama A&M Interns Access An Abundance of Knowledge
In 2024, the DOE Joint Genome Institute and Alabama A&M …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
For the first time in several years, the DOE Joint Genome Institute hosted several UC Merced students this past … and Exploring Novel BGC Detection Techniques on Fungal Genomes Video Transcript: Emerald Nash : What I’m working on … and the fact that I got to do a project involving over 12,000 fungal genomes was just really, really exciting for me …
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Effects of Polar Light Cycle on Microbial Food Web
… researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … was supported by the Australian Research Council (DP150100244) and the Australian Antarctic Science program (project … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is …
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Viruses Reprogram Cells into Different Virocells
… cells as virocells, a change in name first described in 2011 which reflects the metabolic changes they’ve undergone. … from uninfected cells. Duhaime and Sullivan are co-corresponding authors, while the study’s lead author is Cristina … between the  U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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How Maize Makes An Antibiotic Cocktail
… synthesized by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … 1758976 to E.S. and P.Z.) for diterpenoids, by a DOE Joint Genome Institute Community Science Program (JGI-CSP) grant (CSP2568 to P.Z., ES and AH), and by a fellowships provided by …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… community. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) has released its newest 5-Year … Serve the Changing Planet (download a copy at jointgeno.me/2024StrategicPlan .) This plan aligns the DOE Office of … theme. Advancing the JGI’s ability to predict and respond to biogeochemical cycles, which builds on the DOE’s …
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Scaling Up Existing Skill Sets
… to functional genomics. Hear from five of the Summer 2019 interns, who briefly shared their experiences below. … know existed before. Name: Deepika Gunasekaran Class Year: 2nd year graduate student in Quantitative and Systems … Year: 3rd year undergraduate student Mentor: Zhong Wang, Genome Analysis What effect has your summer internship with …
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Krishna Palaniappan
… for the design and maintenance of the Integrated Microbial Genomes (IMG) data warehouse, and integration of genomic and …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … Beginning in the early 2000s , these environmental metagenomes began to offer a window into viral existence. Along … the world, finding over 125,000 partial and complete viral genomes. That study multiplied the number of known viral …
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Crysten Blaby-Haas
Blaby-Haas joined the JGI in 2022 as lead of the Biomolecular Materials Initiative, a … user capability between the JGI and Molecular Foundry for genome-encoded biomaterial discovery, design, and … into the red algae and eukaryotic evolution from the genome of Porphyra umbilicalis (Bangiophyceae, Rhodophyta). …
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Marcel Huntemann
… annotation and methylomics) that run on microbial genomes and metagenomes. He also works on automating intra-department data …
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