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Here, There and Everywhere: Large and Giant Viruses Abound Globally
JGI-led team significantly expands the global diversity of large and … population, the number of viruses in the same drop—the vast majority not harmful to humans could be even larger. … 10 times larger. And yet, while they are found everywhere, comparatively little is known about viruses, much less those …
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Krishna Palaniappan
Krishna is responsible for the design and maintenance of the Integrated Microbial Genomes (IMG) data …
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Fungal Friends or Foes in Plant Roots
Uncovering associations between plant roots and fungi that can help or … of the key community participants and enabling future metagenomics studies.   … The sequencing project was funded by …
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Jinghua Jenny Huang
Jenny is working on the display and visualization of large amount isolate genomic and metagenomic data stored in Oracle databases, Berkeley DB and files in various formats. …
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Petra Byl
Petra is an affiliate researcher who cultivates marine algae infected by giant …
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Neha Varghese
Neha’s key role is to design, benchmark, and apply … implementation of advanced analysis pipelines and tools as well as development and implementation of microservices in …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
For the first time, a team has comprehensively described host-virus dynamics in … virus in 34 hosts or 26 percent of the single cells. Metagenomics sequencing then allowed the team to ask, for the 34 …
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Ancient Algae Reveal Secrets of Plant Evolution
Research uncovers the genetic foundations that helped plants … in close algal relatives  to terrestrial plants showcases how early plants built upon an ancient genetic … varieties able to grow in marginal lands and with minimal resources. Enabling the use of non-arable land for biomass …
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Streamlining Regulon Identification in Bacteria
RIViT-seq technology could speed up associating transcription factors with their target genes. … genes associated with a given transcription factor is resource-intensive and unscalable. To test the efficacy of …
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Computationally Classifying Fungal Lifestyles
Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of concept, researchers developed an algorithm …
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Triggering Morel Fruiting
A collaborative team led by Hao Tan from the Sichuan Academy … culturally, and ecologically important fungi, widely prized as a culinary delicacy, but also because they influence … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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JGI at the AGU Fall Meeting
This year the AGU Fall Meeting, with the theme “Science is … U.S. DOE User Facility: Learn About Available Expertise and Resources, Open-Call Opportunities, and Important Tips for … 13 8:12 am Convention Center eLightning Theater IV: Kuno Kasak, University of Tartu (lightning talk): “Wetland …
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