Search

Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has been studying … technologies and methodologies that facilitate discovery of new secondary metabolites. Prior to joining the JGI, he … Mol. Microbiol. 87, 1223-1236. PubMed … Education … Publications …

… still work in cell-free environments? (Spoiler: Yes.) Think of cells as tiny factories: within their walls they have … Program at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … the first time CRISPR-Cas9 had been used to modify a cell’s genome in order to create lysates with altered metabolic …

… is not exclusively for Euryarchaeota. Atmospheric levels of methane, a potent greenhouse gas, regulate Earth’s … enabled by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … the original methanogens were, but they were discovered by genome sequencing, which is a much less biased approach to …

A new view into a symbiosis could offer benefits to address climate change: pulling … scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Ben Cole and Margot Bezrutczyk in a  recent episode of the Genome Insider podcast. All together, these data offer a …

Nandita is involved in developing new methods to improve genome recovery from single cells and to build sequencing …

In honor of the JGI's 25th anniversary in 2022, we have revisited a … coherent pieces called contigs — into genes and even into genomes — from these environmental samples,” said Matthias … of rumen-digested switchgrass, researchers isolated and sequenced DNA from rumen microbes involved in the digestion …

… combines custom flow cytometric analysis, cell sorting, genome amplification, PCR screening, and 16S sequencing. She … novel flow cytometry protocols for targeted recovery of specific microbes. …

… data modeling, and biological data management. She was one of the co-authors and key developers of the Object-Protocol … data management infrastructure of the Integrated Microbial Genomes (IMG) family of systems. Before joining LBNL in … in an Academic Setting, SSDBM 14, July 2014 … Selected Publications …

… with their target genes. The Science Regulons are a group of genes that can be turned on or off by the same regulatory … in Streptomyces coelicolor . The Impact As an integrative genome science user facility, connecting genes to functions … the 5’-ends by 5’-end sequencing, from which those promoter sequences recognized by a given sigma factor are inferred. …