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JGIota: Looking Back at Methane-Making Microbes
We count on livestock for food and fiber, but raising these animals … down plant matter. So since 2010, the JGI has supported researchers studying those microbial methane-makers. … Sinead Leahy (New Zealand Agricultural Greenhouse Gas Research Centre) and Bill Kelly (AgResearch). …
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The Megadata of Lake Mendota - Part 2: Souped Up Computing
… series is the story of a giant metagenome assembly from Wisconsin’s Lake Mendota. In this episode: a look at the … with the assembler program MetaHipMer2. Oak Ridge National Lab is home to two supercomputers — Summit and Frontier … terabytes of data with MetaHipMer2. And the National Energy Research Scientific Computing (NERSC) has another …
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Novel heavy metal resistance gene clusters are present in the genome of Cupriavidus neocaledonicus STM 6070, a new species of Mimosa pudica microsymbiont isolated from heavy-metal-rich mining site soil
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Genome sequence of the thermophilic fresh-water bacterium Spirochaeta caldaria type strain (H1T), reclassification of Spirochaeta caldaria, Spirochaeta stenostrepta and Spirochaeta zuelzerae in the genus Treponema as Treponema caldaria comb. nov.,
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Whole Genome Analyses Suggests that Burkholderia sensu lato Contains Two Additional Novel Genera (Mycetohabitans gen. nov., and Trinickia gen. nov.): Implications for the Evolution of Diazotrophy and Nodulation in the Burkholderiaceae
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Yasuo Yoshikuni
… of the DNA Synthesis Science Program since 2015. The mission of this program is to harness the power of DNA synthesis, … the Synthetic Biology Pathway Engineering group. His research focus includes engineering of non-model yeasts for production of biofuels and renewable …
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Dealing with Drought: Uncovering Sorghum’s Secrets
Over 40 percent of the cereal crop’s genes respond to drought stress. The Science Fields of drooping stalks … The field experiment is led by a consortium involving researchers from the University of California (UC), … is equipped to deal with adverse environmental conditions, researchers hope to improve yields for other crops under …
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JGI@25: Stories from Intern Alumni
… 2022 marks the JGI’s 25th anniversary . Over the next few months, we’ll be revisiting a number of notable achievements … from a number of universities and organizations. From field research and wet lab experiments, to computational modeling and virtual projects, hear intern alumni Candace …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
Edward Lu and mentor Miguel Romero Sean Saki and mentors  Zhong Wang and Bryce Foster Sivagunalan Thamilarasan and … with team members previously. I think I may keep doing research, but now I think I can lead a team. So maybe I go to industry field, I lead a research team. I think, yeah, that’s maybe one possibility.  …
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NeLLi — Symposium on New Lineages of Life
… “NeLLi 2023 Symposium” delving into the most recent expansions of the Tree of Life and latest discoveries toward the … functional capabilities. Overview of Symposium Goals Metagenomic and single-cell sequence data have provided a means … of these new lineages will provide new cornerstones for research in the areas of bioenergy and biomedicine, as well …
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Expanding Virophage Diversity
DNA genomes that co-infect eukaryotic cells along with giant viruses. Virophages are small viruses with … in capsid maturation. Recently reported in  Microbiome , researchers from the US Department of Energy (DOE) Joint … By mining more than 14,000 publicly available metagenomic datasets in JGI’s  Integrated Microbial Genomes & …
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Alabama A&M Interns Access An Abundance of Knowledge
… an internship program to bring students to the JGI for research training experience. Enabled by the DOE RENEW initiative, undergraduate student Ti’Yanna Watson and graduate student LaMonika Dent worked with JGI … experience in molecular biology and plant functional genomics, because this work is essential for improving crop …
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