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… computational biologist who spends his days wrangling viral genomes and occasionally remembering to document his code. At JGI, he develops tools for viral discovery and analysis, with a particular fondness for RNA viruses – though he'll take a look at anything …

… more about MycoCosm, a data portal with over 2,000 fungal genomes and multi-omics datasets, equipped with interactive web-based tools for comparative genomics and community annotation. Presented …

… software that finds plasmids and viruses within microbial genomes. As mobile genetic elements like viruses spread …

… the latest release of IMG database dedicated to viral genomes assembled from metagenomes. He also demonstrates briefly how to leverage novel …

… and seminars as well as practical hands-on sessions in bioinformatics and biostatistics Several sessions will be devoted to training in the use of the Integrated Microbial Genomes & Microbiomes (IMG/M) system, presented by Natalia …

… the 2023 Highly Cited Researchers from the JGI recognized for their “significant influence in their chosen field or … were all instrumental in the development of the Novel Metagenome Protein Families (NMPF) Catalog . Published in the … He was also senior author on a study which identified new genomes highlighting the diversity of white rot fungi in the …

… analyses at their desks. As part of the DOE JGI’s efforts to promote diversity and inclusion in the sciences, … Cristhian Gutierrez and Bryan Rangel Alvarez are both  California Alliance for Minority Participation (CAMP) students … summer were: Rida Ali, who worked with T.B.K. Reddy on the Genomes OnLine Database; Sarah Fruchart , who worked with …

… hosts sessions in New Orleans and online. Register for the meeting here. Here are some sessions of interest … role of user facilities in accelerating research and tips for submitting successful proposals: Collaborate With a U.S. … context for thousands of newly sampled microbial genomes from North American watersheds (Invited)” 4pm CST …

… a Single Proposal webinar, inviting researchers to apply for access to multiple genomics and molecular … more  here about the “Facilities Integrating Collaborations for User Science” (FICUS) program. Letters of Intent are due … to their resources. … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… on April 25.  On March 17, 2020, a shelter-in-place order for all residents took effect in six San Francisco Bay Area … statewide. In this brief captioned video, JGI Chief Informatics Officer Kjiersten Fagnan reflects on the personal … order.     … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… living on a changing planet. Mo Kaze is a University of California (UC), Merced graduate student working with  Susannah … Community Structure and Methane Production in California’s Canal System,” focuses on anthropogenic impacts on … workforce.     … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

Walnut Creek, after countless generations of sequencing platforms (up to 120 sequencing machines at maximum) maintained by a workforce that numbered more than 100 at its peak, all the … cleanup.lbl.gov .     … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …