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Marcel Huntemann
… several production pipelines (gene calling, functional annotation and methylomics) that run on microbial genomes and metagenomes. He also works on automating … exchange and assists with large scale computations on R&D projects. …
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The Big Deal About Short Plants
Despite their diminutive stature, “short plants” such as mosses could be uniquely powerful in helping … plant genetic sequences to what they do. But sequencing the genome of one short plant — fire moss — had an unexpected …
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
The Sequence to Function: Applications and Analysis for the Future (SFA²F) meeting brings … scientists from academia, industry, and government organizations for three days of scientific presentation, … and informal networking events. JGI will present both a genome center talk and a tech talk. Stop by the JGI booth to …
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JGI@25: Building a Better Bean
… 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable … While a hill of beans may not seem to amount to much, the common bean (Phaseolus vulgaris) is actually a … of the University of Georgia sequenced and analyzed the genome of the common bean. That work was published online …
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Exploring the Diversity of the American Prairie’s Switchgrass
A tall native plant of the North American prairie, switchgrass ( … potential biofuel feedstock. But switchgrass has a complex genome and, as a species, encompasses dizzying diversity. … cold, etc. — to its genes. The undertaking took shovels, trucks — and more than a decade.  …
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Integrating Experimentation with Data
…   Join the Joint Genome Institute (JGI) and the Environmental Molecular Sciences Laboratory (EMSL) for “Empowering Automated Laboratories: … poster sessions, thought-provoking flash talks, and instructive workshops. Researchers from academia, government, and …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
The JGI Engagement Webinar held November 5, 2020 (watch the  video below, captions are available) spotlighted … New Investigator and  Functional Genomics proposal calls, projects can request up to 50 polar and 150 nonpolar … (uM etc).  … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Janey Lee
Janey provides support for custom single-cell user projects and projects within the group. …
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How Maize Makes An Antibiotic Cocktail
Maize produces a family of compounds that protects it against … synthesized by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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IMA genome-F18
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Matthew Kellom
Matt is broadly interested in the interactions between … environment, and using metagenomics to study these complex natural systems. Microbial communities living in … interest. Matt also supports various CSP and FICUS user projects for the Metagenome Program. …
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Neha Varghese
Neha’s key role is to design, benchmark, and apply bioinformatics software to enable analysis and interpretation of genomic and metagenomic data for JGI’s user … community. She also provides support for user science and projects through implementation of advanced analysis …
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