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… the diversity of white rot fungi in the genus Lentinula   The Science Shiitake mushrooms get their name from the same place they often source their nutrients — the … mushroom genomes, and assembling genomes from 60 existing sequences, this work expands the family tree for Lentinula. …

A quick snippet on Antonio Camargo and Simon Roux, a few of the JGI researchers behind software that finds plasmids and viruses within microbial genomes. As mobile genetic elements like viruses …

Brachypodium model system traces polyploid genome evolution. … base state, they are diploids with two genome copies, one from each parent. Having three or more genome copies from additional parents or duplication, also known as …

Lawrence Livermore National Lab biologist Jennifer Pett-Ridge collaborated with … to bring in robots to help process experiments that measure microbial activity in soil. Now, the researchers and robots …

… 2023 marked a decade since the inception of the flagship … all the work that went into this program was the feedback from the graduate student interns; “it changed what I want … interns. For him, it was a special moment to see interns go from being “intimidated and nervous” at the beginning of the …

The human-centered, agile collaboration between the JGI and the … JGI Data Portal , a pilot download experience accessible from JGI’s plant portal Phytozome . Although the Data Portal … are more broadly applicable to the download processes from the other JGI Portals, as well. “For thousands of …

Committee (UEC) recently welcomed three new members earlier this month – Sneha Couvilion of Pacific Northwest … Soil Microbiome SFA. She serves as Secretary within the Microbial Ecology Section of the Ecological Society of … and help develop programs to increase participation from minority-serving institutions in JGI user programs. The …

During the summer of 2021, 13 interns from UC Merced spent eight weeks working virtually with JGI mentors to investigate rigorous research … P. hallii Mutant Library … Evaluation of Binning Tools for Microbial Eukaryotes in Metagenomes … Functional exploration …

JGI's Simon Roux describes the structure and content of the IMG/VR v3 database (img.jgi.doe.gov/vr), … of IMG database dedicated to viral genomes assembled from metagenomes. He also demonstrates briefly how to … to browse and search through the more than 2 million viral sequences available in IMG/VR v3. …