Results

Genome analyses reveal population structure and a purple stigma color gene candidate in finger millet
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Genomic Signatures of Strain Selection and Enhancement in Bacillus atrophaeus var. globigii, a Historical Biowarfare Simulant
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Genomic Methods and Microbiological Technologies for Profiling Novel and Extreme Environments for the Extreme Microbiome Project (XMP).
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Divergence among rice cultivars reveals roles for transposition and epimutation in ongoing evolution of genomic imprinting
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Ancient Algae Reveal Secrets of Plant Evolution
… land over 600 million years ago. The Science By studying the genes of land plants’ closest algal relative,  … to land. Key gene groups involved in stress tolerance and multicellularity enabled plants to develop complex … Berkeley National Laboratory (Berkeley Lab), scientists sequenced the genomes of four  Zygnematophyceae algae, which …
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Scaling Up Existing Skill Sets
Over the course of the summer, the JGI-UC Merced Genomics Internship paired six UC Merced students with seven JGI researchers for bioinformatics internship opportunities in fields ranging from … Year: 3rd year undergraduate student Mentor: Zhong Wang, Genome Analysis What effect has your summer internship with …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
Understanding the shared genetic toolkit of ancestral and present-day … researchers focused on the full composition of genes, or pangenome, of the model plant  Marchantia polymorpha. Commonly … framework provided by these high quality reference genome sequences could help researchers better understand related …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
For the first time in several years, the DOE Joint Genome Institute hosted several UC Merced students this past … mentor Bryce Foster, Benchmarking Bioinformatics Tools for Sequence Similarity Searching Morgan Lavenstein Bendall and …
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Arachnid relationships based on mitochondrial genomes: Asymmetric nucleotide and amino acid bias affects phylogenetic analyses
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Transcription Factor Family-Based Reconstruction of Singleton Regulons and Study of the Crp/Fnr, ArsR, and GntR Families in Desulfovibrionales Genomes
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RegPrecise web services interface: programmatic access to the transcriptional regulatory interactions in bacteria reconstructed by comparative genomics
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Defining the Boundaries and Characterizing the Landscape of Functional Genome Expression in Vascular Tissues of Populus using Shotgun Proteomics
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