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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
For the first time, a team has comprehensively described host-virus dynamics in a microbial … In microbial mats, communities of microorganisms live among viruses that infect them. But what trends govern those … virus had been infecting the cell. The team assembled 130 genomes from their sample — a small proportion of the …
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Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305T), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended
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Busting the Unbreakable Lignin
… shows anaerobic fungi can degrade the hardiest of plant components   The Science There are three main ingredients to … cumulatively called lignocellulose, are the primary components of hardy cell walls. It’s the cellulose and …
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Genome sequences of key bacterial symbionts of entomopathogenic nematodes: Xenorhabdus cabanillasii DSM17905, Xenorhabdus ehlersii DSM16337, Xenorhabdus japonica DSM16522, Xenorhabdus koppenhoeferii DSM18168, and Xenorhabdus mauleonii DSM17908
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Extracting the Secrets of Secondary Metabolites
CRAGE-CRISPR combo helps further demystify biosynthetic gene clusters.  The Science Microbial secondary metabolites, those molecules not essential for growth … Repeats) is the leading tool for accurately editing genomes, its effectiveness has historically been limited due …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
As SIP experiments shed more light on microbial communities than ever before — especially with the prospect … hundreds of stable isotope probing genome-resolved metagenomes and will be implementing new tools in KBase to …
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Matthew Kellom
Matt is broadly interested in the interactions between microbial life and environment, and using metagenomics to study these complex natural systems. Microbial communities living in … interest. Matt also supports various CSP and FICUS user projects for the Metagenome Program. …
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Neha Varghese
… bioinformatics software to enable analysis and interpretation of genomic and metagenomic data for JGI’s user community. She also provides support for user science and projects through implementation of advanced analysis …
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Ben Bowen
Specializing in mass spectrometry-centered projects, Dr. Bowen’s work focuses on developing high-performance computing workflows and integrating mathematics and …
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The JGI announces FY25 awardees for our Community Science Program Annual Call
… excited to announce the 18 scientists selected for our 2025 Community Science Program Annual Call. These projects include cutting-edge research into microbial … mats — to reveal how these systems adapt and contribute to global biogeochemical cycles. Additional …
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New Lineages of Life Group
Our research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … structure and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. …
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Tina Clarke
… joined the Lab in 2007 as the Sr. Human Resources Division Partner for the Joint BioEnergy Institute (JBEI) and in … (JGI). Tina serves in an HR advisory role to Division/Area management and supervisors to recommend solutions and appropriate actions on diverse HR …
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