FOAM (Functional Ontology Assignments for Metagenomes): a Hidden Markov Model (HMM) database with environmental focus
Results
Comparative Genomics and Transcriptomics to Analyze Fruiting Body Development in Filamentous Ascomycetes
Microbial functional diversity across biogeochemical provinces in the central Pacific Ocean
RegPrecise web services interface: programmatic access to the transcriptional regulatory interactions in bacteria reconstructed by comparative genomics
Genomics, Exometabolomics, and Metabolic Probing Reveal Conserved Proteolytic Metabolism of Thermoflexus hugenholtzii and Three Candidate Species From China and Japan
Genomic and functional analyses of fungal and bacterial consortia that enable lignocellulose breakdown in goat gut microbiomes
Comparative genomics and physiology of the genus Methanohalophilus, a prevalent methanogen in hydraulically fractured shale
Coral life history and symbiosis: Functional genomic resources for two reef building Caribbean corals, Acropora palmata and Montastraea faveolata
Comparative genomics of clinical and environmental Vibrio mimicus
Functional plasticity of HCO3 – uptake and CO2 fixation in Cupriavidus necator H16
Comparative genomics of Mollicutes-related endobacteria supports a late invasion into Mucoromycota fungi
Integrative genomics reveals paths to sex dimorphism in Salix purpurea L
