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CTCF-mediated functional chromatin interactome in pluripotent cells
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Improving the Cacao Genome and Phytozome
… used for systemic orthology to enable use for both cacao functional biology and breeding.     … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Nitrosococcus watsonii sp. nov., a new species of marine obligate ammonia‐oxidizing bacteria that is not omnipresent in the world's oceans: calls to validate the names ‘Nitrosococcus halophilus’ and ‘Nitrosomonas mobilis’
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… their collaborations. One review article in the collection, Genomics-enabled analysis of specialized metabolism in … through the JGI DNA synthesis Community Science Program (CSP) Functional Genomics, the system allows scientists to test … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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High-Throughput Functional Genomics for Energy Production
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Chapter 4 Functional genomics of Chlamydomonas reinhardtii
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How Filamentous Fungi Sense Food
… filamentous fungus  Neurospora crassa, and to identify and decide on the order in which this fungus breaks down plant … use of deletion strains generated by Grant P01 GM-068087 “Functional Analysis of a Model Filamentous Fungus” and that … a Joint Genome Institute Community Science Program grant (CSP 982), and funds from the Fred E. Dickinson Chair of Wood …
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JGI Accepts 17 Proposals for Community Science Program
… been approved through the annual Community Science Program (CSP) call of the U.S. Department of Energy (DOE) Joint Genome … intent submitted. Many of the proposals focus on harnessing genomics to developing sustainable resources for biofuels …
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The Power of One, Amplified
… A preview of how large-scale single cell genomics complements metagenomics studies. The Science … sequencing technologies and bioinformatic tools have helped decode the genomes of tens of thousands of previously … of samples, while single cell approaches have been typically used as a complement to isolate sequencing, i.e. when …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… 2023 marked a decade since the inception of the flagship internship … alumni, and other staff gathered at the Integrative Genomics Building, the JGI’s home at Berkeley Lab, as … Biology professor Carolin Frank reflected on the past decade and shared favorite memories in a panel discussion.  …
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Raman-based sorting of microbial cells to link functions to their genes
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Scaling Up Existing Skill Sets
… Over the course of the summer, the JGI-UC Merced Genomics Internship paired six UC Merced students with seven … in fields ranging from plant-microbe interactions to functional genomics. Hear from five of the Summer 2019 interns, who briefly shared their experiences below. …
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