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Chemical synthesis rewriting of a bacterial genome to achieve design flexibility and biological functionality
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The contributions from the progenitor genomes of the mesopolyploid Brassiceae are evolutionarily distinct but functionally compatible
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Comparative Analysis of 126 Cyanobacterial Genomes Reveals Evidence of Functional Diversity Among Homologs of the Redox-Regulated CP12 Protein    
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Jeremy Schmutz
Institute and the collaborative projects funded through the CSP program. In addition to continuing to develop strategies … gene atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom. … green millet Setaria viridis enables discovery of agronomically valuable loci. Nature Biotechnology 38:1203-1210. …
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Taking Stock of the Known and Unknown Microbial Space
… said co-first author Dongying Wu, a member of the Functional Annotation team within the JGI’s Microbiome Data … study, added co-first author Rekha Seshadri, is a wake-up call to revive the art of hands-on microbiology and … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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I-Min (Amy) Chen
Dr. I-Min A. Chen received her Ph.D. in Computer Science. Her research has been focused on semantic and … of uncultured virus genomes within a framework of extensive functional, taxonomic, and ecological metadata. Nucleic acids research Jan 2023 Camargo AP, Call L, Roux S, Nayfach S, Huntemann M, Palaniappan K, …
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A One-Stop Shop for Analyzing Algal Genomes
… the Greek phykos, meaning seaweed. Seaweeds are algae, but many kinds of algae exist. During the course of … sequence and understand. A team of researchers led by Algal Genomics Program lead Igor Grigoriev and data scientist Alan … — so researchers can easily explore the evolutionary and functional relationships among the different algae. …
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Functional Genomics of Novel Secondary Metabolites from Diverse Cyanobacteria Using Untargeted Metabolomics
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Rex Malmstrom
Applications group to operate a similar single-cell genomics pipeline that provides JGI users access to the … Probing (SIP) Metagenomics pipeline  that reveals in situ functional activities of specific microbial groups within …   A centimeter-long bacterium with DNA contained in metabolically active, membrane-bound organelles. Science  …
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Identification of novel biomass‐degrading enzymes from genomic dark matter: Populating genomic sequence space with functional annotation
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Human-Specific Gain of Function in a Developmental Enhancer
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ShotgunFunctionalizeR: an R-package for functional comparison of metagenomes
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