Skip to main content
Logo
Logo Logo

Header Utility Nav

  • Mission
  • Science Programs
  • Who We Are
  • Data Policy & Support
  • Contact

Main navigation

  • Analyze Data
    • JGI Portals
      All the data we generate are publicly available
    • Data Ecosystem
      Meet our data partners
    • How to Use Our Systems
      Learn more about navigating JGI portals
  • Work With Us
    • User Programs
      Learn more about our proposal calls
    • Offerings & Capabilities
      Learn how the JGI can advance your science
    • Industry Partnerships
      Opportunities for industry to access JGI resources
    • Educational Partnerships
      Empowering the next generation of researchers
    • Events
      JGI-hosted meetings, seminars, workshops and more
  • User Stories
    • Science Stories
      Read about JGI-enabled user research
    • Genome Insider
      Listen to our podcast to follow the science that the JGI supports
    • Announcements
      The latest news on new users, projects and JGI scientists
    • Publications
      Search user publications by year, program and proposal type
    • Approved Proposals
      Find a list of previously-accepted proposals

Main navigation

  • Analyze Data
    • Menu
    • JGI Portals
      All the data we generate are publicly available
    • Data Ecosystem
      Meet our data partners
    • How to Use Our Systems
      Learn more about navigating JGI portals
  • Work With Us
    • Menu
    • User Programs
      Learn more about our proposal calls
      • CSP Overview
      • FICUS Overview
      • Special Initiatives & Programs
    • Offerings & Capabilities
      Learn how the JGI can advance your science
      • Products
      • Sequencing
      • Synthesis
      • Metabolomics
    • Industry Partnerships
      Opportunities for industry to access JGI resources
    • Educational Partnerships
      Empowering the next generation of researchers
    • Events
      JGI-hosted meetings, seminars, workshops and more
  • User Stories
    • Menu
    • Science Stories
      Read about JGI-enabled user research
    • Genome Insider
      Listen to our podcast to follow the science that the JGI supports
    • Announcements
      The latest news on new users, projects and JGI scientists
    • Publications
      Search user publications by year, program and proposal type
    • Approved Proposals
      Find a list of previously-accepted proposals

Header Utility Nav

  • Mission
  • Science Programs
    • Menu
    • DNA Synthesis Program
    • Fungal & Algal Program
    • Metabolomics Program
    • Metagenome Program
    • Microbial Program
    • Plant Program
    • Secondary Metabolites Program
  • Who We Are
    • Menu
    • Leadership
    • Program & Platform Leads
      • Environmental Genomics
      • Metabolomics Technology
      • Micro-Scale Applications
      • Microbiome Data Science
      • New Lineages of Life
      • Plant Microbial Interactions
      • Single Cell Research
      • Strain Engineering
      • Synthetic Biology Informatics
      • Synthetic Biology Lab
      • User Support Analysis
      • Viral Genomics
    • Committees
      • JGI User Executive Committee
      • JGI Advisory Committee
      • DNA Synthesis Science User Advisory Committee
      • Fungal & Algal Program User Advisory Committee
      • Informatics Advisory Committee
      • Plant Program User Advisory Committee
      • Prokaryote Program User Advisory Committee
      • Secondary Metabolites Advisory Committee
  • Data Policy & Support
    • Menu
    • Project Management Office
    • Data Policy
  • Contact

Breadcrumb

  1. Home
  2. Search

Search

Results


Fungal Friends or Foes in Plant Roots
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … . The work was partly enabled by a JGI Community Science Program (CSP) proposal led by INRAE’s Francis Martin that … other microbes not to impede host health. For JGI Fungal Program head Igor Grigoriev , the paper is an “excellent …
Learn more
Digging into Microbial Ecosystems Deep Underground
… these systems.” -Mike Wilkins, Colorado State University GI users and microbiome researchers Mike Wilkins and his … initiative called Facilities Integrating Collaborations for User Science (FICUS) . Through FICUS, the researchers have tapped into the …
Learn more
Cataloging the Microbes that Manage the Health of River Systems
… States. They also provided multiple access points to the information. The team harnessed a community-science program to collect samples from across the country to … not only how researchers can successfully partner with DOE user facilities and resources on such large-scale multi-omic …
Learn more
A More Intuitive Phytozome Interface
… been under active development for over 5 years, provides users with the genome browsers, gene pages, search, BLAST … infrastructure. Phytozome v13 has been accessible to users since 2019.  We have attempted to make sure users will … bookmarked v12 links (e.g., to gene reports and organism information pages) will be seamlessly forwarded to Phytozome …
Learn more
Data Ecosystem
… partnerships to offer new capabilities and resources to users through a BER data ecosystem.  A data ecosystem is a … and help unravel these complexities  This ecosystem serves users better in the following ways: Data integration is … by artificial intelligence and other tools. By bringing users together through our systems, we build far-reaching …
Learn more
From Competition to Cooperation
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … of Energy Joint Genome Institute, a DOE Office of Science User Facility, and supported by the Office of Science of the … Interfaces Scientific Focus Area in the Genomic Science Program, the Office of Biological and Environmental Research …
Learn more
JGI Earth Month: Wetlands Work in #TenHundredWords
… graduate student working with  Susannah Tringe , JGI’s User Programs deputy and head of the Microbial Systems group … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National … some of the most pressing challenges of our time. For more information, please visit  energy.gov/science/office-science …
Learn more
Protocols
… Find protocols provided by JGI and the JGI user community below for DNA preparation tools, high …
Learn more
How Filamentous Fungi Sense Food
… these fungi detect which complex chains are available; this information triggers pathways to determine which enzymes … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … work was enabled in part through JGI’s Community Science Program through a proposal akin to the Encyclopedia of DNA …
Learn more
JGI-KBase Panel at SACNAS
… through the Department of Energy-funded National Labs, User Facilities and Programs, and introduce best practices for anyone to get …
Learn more
Dan Rokhsar
… Genomics group, and is past lead of the Eukaryotic Genome Program (2010-2019), and JGI Chief Informatics Officer (2013-2016). Dr. Rokhsar joined the … Laboratory 2000 John Simon Guggenheim Fellow 2000-present Program Director, Berkeley NHGRI Training Program in …
Learn more
JGI Portals
… GOLD is a web resource for comprehensive access to information regarding genome and metagenome sequencing … potential, antibiotic resistance genes, and ecosystem information. … tools for comparative genomics of fungi. Mycocosm enables users to navigate across sequenced fungal genomes, and to …
Learn more

Pagination

  • First page « First
  • Previous page ‹‹
  • …
  • Page 10
  • Page 11
  • Page 12
  • Page 13
  • Page 14
  • Page 15
  • Page 16
  • Page 17
  • Page 18
  • …
  • Next page ››
  • Last page Last »
Logo
  • LinkedIn
  • X
  • Bluesky
  • Youtube
Subscribe to our Newslettermail icon

JGI Footer

  • About
  • Contact
  • Careers
  • Media

Analyze Data Footer

  • Analyze Data
  • JGI Portals
  • Data Ecosystem
  • How to Use Our Systems

Work With Us Footer

  • Work With Us
  • User Programs
  • Offerings & Capabilities
  • Industry Partnerships
  • Educational Partnerships
  • Events

User Science Footer

  • User Stories
  • Science Stories
  • Genome Insider
  • Announcements
  • Publications
  • Approved Proposals
© 1997-2026 The Regents of the University of California

JGI Footer Utility

  • Disclaimer
  • Accessibility / Section 508 Statement
  • Archives
  • Site Feedback
Logo

Berkeley Footer

  • Contact
  • Visit Us
  • Subscribe
  • X
  • LinkedIn
  • Instagram
  • Facebook
  • Youtube
Logo
Lawrence Berkeley National Laboratory is a U.S. DOE Office of Science
national laboratory managed by the University of California.

Berkeley Footer Utility

  • Staff Directory
  • For Employees
  • Emergency Status
  • Privacy & Security Notice
  • Site Feedback