Results

Illuminating the Virosphere Through Global Metagenomics
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A pipeline for targeted metagenomics of environmental bacteria
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CoverM: Read alignment statistics for metagenomics.
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Metagenomes and Metatranscriptomes of a Glucose-Amended Agricultural Soil
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The Airborne Metagenome in an Indoor Urban Environment
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Zhong Wang
Research in the Analysis R&D group focuses on developing new bioinformatics solutions to support JGI in adopting new genomics technologies, scaling up genomics analysis to peta-bases, … analyses, next-generation transcriptome de novo assembly, metagenome and metatranscriptome assembly, Hadoop based on …
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Systematic Identification of Gene Families for Use as “Markers” for Phylogenetic and Phylogeny-Driven Ecological Studies of Bacteria and Archaea and Their Major Subgroups
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Global Diversity of the Brachypodium Species Complex as a Resource for Genome-Wide Association Studies Demonstrated for Agronomic Traits in Response to Climate
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Genome-Wide Association Studies across Environmental and Genetic Contexts Reveal Complex Genetic Architecture of Symbiotic Extended Phenotypes
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Data Ecosystem
… specifically optimized for high-performance computing environments. … KBase is a critical partner in enabling systems … scales ranging from single genes and individual genomes to metagenomes to systems-level modeling and understanding. JGI … through distributed data infrastructure and linked data technologies. The NMDC seeks to connect and engage the …
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Duplications and losses of genes encoding known elements of the stress defence system of the Aspergilli contribute to the evolution of these filamentous fungi but do not directly influence their environmental stress tolerance
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Metagenomic analysis of a stable trichloroethene-degrading microbial community
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