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Better Genome Editing for Bioenergy
… technology to enable improvements in microbial oil production. The Science CRISPR-Cas9 is a powerful, high-throughput gene-editing tool that can help scientists engineer organisms for bioenergy applications. … Cas9 needs guide RNA to lead it to the correct sequence to snip — but not all guides are effective. To …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
Team develops a computational pipeline to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring … even less known than DNA viruses,” said Simon Roux , a JGI scientist and one of the project co-leads. “But same as DNA …
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Dan Rokhsar
… in 2000 as the founding Associate Director for Computational Genomics, and led the computational efforts directed … and animals by combining computational genome analysis, sequence-based genetic methods, and comparative … NY PhD in Physics, Cornell University, NY Postdoctoral scientist, IBM Watson Research Center, Yorktown Heights, NY …
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Rex Malmstrom
Dr. Malmstrom is a Staff Scientist and leader of the Microscale Applications group. Before joining the JGI in 2010, he made the first … Theodore Wolf Prize for outstanding dissertation in life sciences 2006 … Education … Selected Publications … …
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Tanja Woyke Elected to American Academy of Microbiology
Congratulations to the JGI’s Tanja Woyke , who has been … and insight on critical issues in microbiology.  A senior scientist at Lawrence Berkeley National Laboratory (Berkeley … National Laboratory, who spoke at the 2019 New Lineages of Life (NeLLi) Meeting organized by the JGI, were also among …
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Waiting to Respire
… to ancestral bacteria’s energy sources. More than two billion years ago, cyanobacteria acquired the ability to produce … byproduct. The abundance of oxygen shaped the evolution of life on Earth, and led to the development of multicellular … (JGI), a DOE Office of Science User Facility, and research scientist Frederik Schulz in Woyke’s Single Cells group had …
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John Vogel
Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. Prior to this, he served as a … genomic resources that fostered the widespread adoption of Brachypodium distachyon as an experimental model for … on developing plant functional genomic resources (e.g. sequenced mutant collections, transformation technology, …
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Daniel Udwary
Dr. Udwary serves as a computational biologist for JGI’s Secondary Metabolites group. His research interests lie in use … member at the University of Rhode Island, as a Senior Scientist at Warp Drive Bio, and as a bioinformatics HPC …
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An Automated Tool for Assessing Virus Data Quality
CheckV can help researchers assess virus sequence fragments and data quality. The Science Through advances in sequencing technologies and computational approaches, more and more virus sequences are being … their environments. Environmental DNA sequencing can help scientist to recover the genomes of these viruses and …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
A two-day kick-off meeting held at Lawrence Berkeley National Laboratory (Berkeley Lab) marked the visit of an … challenges.”  During the workshop UDE and Berkeley Lab scientists discussed a diverse range of topics related to … be measured by IR-spectroscopy and mass spectrometry in sequence in real time at an atomic resolution. We are …
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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. … of its kind, with an interactive browser that allows algal scientists and enthusiasts to look deep into more than 100 … algal genomes can be incredibly complex and difficult to sequence and understand. A team of researchers led by Algal …
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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. … of its kind, with an interactive browser that allows algal scientists and enthusiasts to look deep into more than 100 … algal genomes can be incredibly complex and difficult to sequence and understand. A team of researchers led by Algal …
Learn more

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