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Dan Rokhsar
Dr. Rokhsar joined the DOE Joint Genome Institute in 2000 as the … Genomics, and led the computational efforts directed towards the sequencing, annotation, and analysis of three … IBM Watson Research Center, Yorktown Heights, NY … Publications … 2018 Marthella Foskett Brown Chair, …
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Nikos Kyrpides
Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome Biology Program and the development of the … microbial genomes and metagenomes (IMG). He became the Metagenomics Program head in 2010 and has the combined Microbial … Thousands of Small, Novel Genes. Cell. 178(5):1245-1259. Publications on Pubmed | Google Scholar … Thomson Reuters …
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Biases in genome reconstruction from metagenomic data
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A metagenomic perspective on the microbial prokaryotic genome census
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Picking Up Threads of Cotton Genomics
Analysis reveals cotton genome stability across global … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
New 5-year strategic plan outlines how the JGI will advance the … has released its newest 5-Year Strategic Plan: Innovating Genomics to Serve the Changing Planet (download a copy at … responsibly managing people and resources. “The plan looks toward exciting new directions in science, technology and …
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Metagenomics
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A Community Resource for Secondary Metabolite Researchers
The Secondary Metabolism Collaboratory encourages user engagement. The Science In … more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence …
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A Complex Confection Decoded: Sugarcane Reference Genome
Sugarcane was the last major crop without a reference quality genome and now crop researchers can work toward advancing sugarcane biotechnology. The Science … the HudsonAlpha Institute for Biotechnology and the Arizona Genomics Institute. The work was partly enabled by the JGI’s …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … the microbes there,” said Simon Roux , the Viral Genomics Group Lead at the JGI.  To understand the … Along with highlighting the viruses in a given sample, metagenomics shed light on another key aspect of viruses in …
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Tanja Woyke
After studying the mechanism of action of antifungal natural … deciphered function and host-symbiont interplay using metagenomics. Taking on a Research Scientist position in 2007, … Microbial Genomics Conference (2017-current) Genomic Standards Consortium Advisory Board member (2018-current) … User Programs … Education … Awards and Service … Selected Publications …
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NeLLi — Symposium on New Lineages of Life
… “NeLLi 2023 Symposium” delving into the most recent expansions of the Tree of Life and latest discoveries toward the evolution of cellular complexity and microbial … functional capabilities. Overview of Symposium Goals Metagenomic and single-cell sequence data have provided a means …
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