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Refined annotation and assembly of the Tetrahymena thermophila genome sequence through EST analysis, comparative genomic hybridization, and targeted gap closure
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… results from single cells. The Science Studying the  genomes of microorganisms is incredibly useful for understanding the … usually employ two different methods; shotgun metagenomic sequencing and single-cell sequencing. For years, extracting …
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Finding the Fermenters
… researchers built an interactive and comprehensive database of fermentative prokaryotes. The Science Most organisms use … browser that allows other researchers to study the genomes and predict the metabolic abilities of these … phenotype and genotype of fermentative prokaryotes on IMG … Publication … Datasets … Datasets … Datasets …
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JGIota: Looking Back at Methane-Making Microbes
We count on livestock for food and fiber, but raising these animals also produces an atmosphere-warming gas: methane. …
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Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium
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Evolution and comparative genomics of the most common Trichoderma species
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A parts list for fungal cellulosomes revealed by comparative genomics
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Comparative genomics of xylose-fermenting fungi for enhanced biofuel production
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Genome-scale phylogeny and comparative genomics of the fungal order Sordariales
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Comparative genomics and expression levels of hydrophobins from eight mycorrhizal genomes
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Plant-Microbial Interactions Group
… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … and are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …
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The More the Merrier: Making the Case for Plant Pan-genomes
… the concept, “the more the merrier,” with respect to their genomes. In their base state, they are diploids with two … “It offers us the possibility to explore genomically the whole complex of progenitors and descendant species and, … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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