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Mapping the Earth’s Hidden Fungal Kingdom
… written in a yet-to-be-deciphered language. Researchers with the Department of Energy (DOE) Joint Genome Institute … Earth's fungal kingdom. The manuscript reviews about 200 publications linking evolutionary history and innovations … struggle to identify and classify new species from environmental samples. Meanwhile, even well-studied genomes …
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High-quality draft genome sequence of Pseudomonas aeruginosa san ai, an environmental isolate resistant to heavy metals
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Viral niche-partitioning: Comparative genomics of giant viruses across environmental gradients in a High Arctic freshwater-saltwater lake
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… influence in their chosen field or fields through the publication of multiple highly cited papers during the last … Nikos Kyrpides, Natalia Ivanova and Simon Roux, along with data from a consortium that included Susannah Tringe … as a Nature Microbiology study that leveraged population genomics to investigate archaeal hitchhikers and found that, …
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Improving the Cacao Genome and Phytozome
… Global chocolate brands can’t exist without cocoa According to the  International Cocoa … metric tons . The global chocolate brands couldn’t exist without cocoa.  But today the plant is under threat due to … of the world’s largest buyers of cocoa, is collaborating with others to develop healthier and more productive cacao …
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Environmentally responsive QTL controlling surface wax load in switchgrass
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Silver age of GOLD introduces new features
… the appropriate contextual information, or metadata, stored with them. GOLD provides manually curated metadata resources for organisms and environmental samples. The database aggregates relevant … a broad range of activities from proposal intake to publication. Information is also obtained and cross-checked …
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Game On: High School Students Drive Everglades Metagenomics Study
… The course had a defined set of objectives, and started with an image of a spoonful of dirt with the question: Do … a serendipitous partnership. The class decided to do an environmental microbial community (metagenomic) soil study … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about …
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JGI on the 2021 Highly Cited Researchers List
… influence in their chosen field or fields through the publication of multiple highly cited papers during the last … multi-institutional research team that combined field data with a reference switchgrass genome to associate climate … past year, through programs including the JGI-UC Merced Genomics Internship Program and the DOE Office of Science …
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Uncovering Novel Genomes from Earth’s Microbiomes
… repository of 52,515 microbial draft genomes generated from environmental samples around the world, expanding the known … and the  DOE Systems Biology Knowledgebase (KBase) . Metagenomics is the study of the microbial communities in the environmental samples without needing to isolate individual organisms, using …
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Testing the kinetic tradeoff between bicarbonate versus phosphoenolpyruvate affinity and glucose-6 phosphate response of phosphoenolpyruvate carboxylase from two C4 grasses
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Novel metabolic interactions and environmental conditions mediate the boreal peatmoss-cyanobacteria mutualism
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