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Next generation sequencing data of a defined microbial mock community
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A phylum-level phylogenetic classification of zygomycete fungi based on genome-scale data
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HipMCL: a high-performance parallel implementation of the Markov clustering algorithm for large-scale networks
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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US … also funded under the RC-SFA at PNNL by DOE BER ESS. Metagenomic and metatranscriptomic sequencing was performed at …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
Survey of Setaria's natural diversity reveals seed dispersal in … be specific to species or groups of species.  The genome data also revealed that green millet was introduced into the … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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A Grass Model to Help Improve Giant Miscanthus
Miscanthus  sequence offers insights into benefits of polyploidy and … perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass  Miscanthus sinensis … of the tetraploid M. sacchariflorus whole genome sequence data was funded by the BBSRC Core Strategic Programme in …
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Nikos Kyrpides
… 2004 to lead the Genome Biology Program and the development of the comparative analysis platforms for microbial genomes and metagenomes (IMG). He became the Metagenomics Program head in 2010 and has the combined Microbial … Thousands of Small, Novel Genes. Cell. 178(5):1245-1259. Publications on Pubmed | Google Scholar … Thomson Reuters …
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A Plant Root Atlas for Tracking Developmental Trajectories
A collaborative team led by Geoffrey Schiebinger at the University of British Columbia, … developed for this purpose by the JGI plant comparative genomics data portal  Phytozome and will be available for … with resulting reports and a  perspective article . Publication: Shahan R et al.  A single cell Arabidopsis root …
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Analysis of Brachypodium genomes with genome-wide optical maps
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Performance evaluation and tuning of BioPig for genomic analysis
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Comparative Genomics Analysis of Trichoderma reesei Strains
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Socotra Island the forgotten fragment of Gondwana: Unmasking chameleon lizard history with complete mitochondrial genomic data
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