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Disclaimer
… monitoring of this use by system or security personnel. … With respect to documents available from this server, … be required. The public may copy and use this information without charge, provided that this Notice and any statement …
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Hiroshi Otani
… research activity is focused on developing and implementing new technologies and methodologies that facilitate discovery of new secondary metabolites. Prior to joining the JGI, he … Mol. Microbiol. 87, 1223-1236. PubMed … Education … Publications …
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A new reference genome for Sorghum bicolor reveals high levels of sequence similarity between sweet and grain genotypes: implications for the genetics of sugar metabolism
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Complete genome sequence of Jiangella gansuensis strain YIM 002T (DSM 44835T), the type species of the genus Jiangella and source of new antibiotic compounds
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IMG Group
… and exa- scales on multicore and many core architectures with the ultimate objective of facilitating omics-based … it has also become possible to identify speciation events within existing species. Within the JGI’s production pipeline, ANI is used to …
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DOE Metrics
… available hours. Other DOE Quarterly Metrics Q1 – Report on new computational developments for improving microbial, … [Download PDF] Q2 – Report on progress developing new experimental capabilities to analyze complex genomic or metagenomic datasets. [Download PDF] Q3 – Report on new computational approaches for the annotation of genomic …
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Two new high-resolution crystal structures of carboxysome pentamer proteins reveal high structural conservation of CcmL orthologs among distantly related cyanobacterial species
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Picking Up Threads of Cotton Genomics
… fields look like popcorn is literally growing on plants, with fluffy white bolls bursting out of the green pods in … for Biotechnology. “The goal has been for all this new cotton work, and even the original cotton project was to … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton …
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Nitrosococcus watsonii sp. nov., a new species of marine obligate ammonia‐oxidizing bacteria that is not omnipresent in the world's oceans: calls to validate the names ‘Nitrosococcus halophilus’ and ‘Nitrosomonas mobilis’
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… on microbial communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine … Generating these datasets opens up the possibility of new insights across ecosystems and research teams. Even … experiments.  Especially as machine learning and AI promise new ways of harnessing large datasets, JGI researchers and …
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Uncovering Novel Genomes from Earth’s Microbiomes
… of the microbial communities in the environmental samples without needing to isolate individual organisms, using … been associated with a host – with 23,000 MAGs. Modeling A New Path for Metagenomics Researchers Building upon these … researchers might not be willing to dive into an entirely new research field [metabolic modeling], but they might be …
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Novel heavy metal resistance gene clusters are present in the genome of Cupriavidus neocaledonicus STM 6070, a new species of Mimosa pudica microsymbiont isolated from heavy-metal-rich mining site soil
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