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Measurement of bacterial replication rates in microbial communities
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Gene Context Analysis in the Integrated Microbial Genomes (IMG) Data Management System
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Strain Engineering
… The focus of this group, in recent years, has been to bring generalizable technologies to … The developed strains represent an additional phase of user-accessible project types, in which DNA-based … integrated into a taxonomically diverse suite of microbial chassis strains for elevated opportunity for …
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Prepublication data sharing
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Clustering Categorical Data
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A Grass Model to Help Improve Giant Miscanthus
… Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A reference … that stores nutrients from one growing season to the next. By studying genes that are turned “on” or “off” at … (BER), grant nos. DE-SC0006634 and DE- SC0012379. The generation of the tetraploid M. sacchariflorus whole genome …
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Sediment microbial communities in Great Boiling Spring are controlled by temperature and distinct from water communities
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Co-occurrence networks reveal more complexity than community composition in resistance and resilience of microbial communities
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User Support Analysis Group
… The User Support Analysis group provides computational analysis for new … epigenomics. Our work varies in scope from the development of highly customized analysis workflows for new product … development of automated analysis pipelines for standard sequencing products performed at scale. Our group also …
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Prokaryote Program User Advisory Committee
… The Prokaryote Advisory Committee is chartered to offer advice, … on the effective management and strategic objectives of the microbial and metagenome programs and report back to them. …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… — JGI researchers and collaborators work to create FAIR datasets to maximize returns on these advances. Over the … catalyzed by microbial communities. By pairing RNA or DNA sequencing with tracings of stable, heavy isotopes, SIP … The idea is to improve the information produced in the next few decades of SIP experiments. “I’m looking forward to …
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JGI Accepts 17 Proposals for Community Science Program
… Monitoring Inter-Organism Interactions Within Ecosystems Latest portfolio of approved proposals highlight biodiversity and how … State University and colleagues are interested in the microbial communities that live on Alaska’s glacially …
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