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Genomic and functional analyses of fungal and bacterial consortia that enable lignocellulose breakdown in goat gut microbiomes
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Genome expansion by allopolyploidization in the fungal strain Coniochaeta 2T2.1 and its exceptional lignocellulolytic machinery
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Workforce Development & Education Outreach
… to enter the STEM workforce by fostering an understanding of our role in advancing the energy and environmental genomics research frontier.  Learn more about the JGI's … internship partnership that started in the summer of 2014. … Modeled on the JGI-UC Merced internship program, a …
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A Collaboration to Improve Plant Genome Annotations Across Species
To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the HudsonAlpha … evidence across species. Centralized databases with large-scale transcriptome projects such as Expression Atlas and … it to fill gaps in the under-sampled area of the plant phylogeny and improving genome annotations. For that …
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Sequencing the fungal tree of life
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Comparative Genomics of the Dormancy Regulons in Mycobacteria
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PhycoCosm, a comparative algal genomics resource
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Comparative genomics of biotechnologically important yeasts
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
For many scientists, the culmination of their work into a written report that is published in a … determination. Rhondene Wint, an alumna of the DOE Joint Genome Institute (JGI)-UC Merced internship program and … current PhD student, reached this milestone with a recent publication in Molecular Biology and Evolution . “It’s my …
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A Grass Model to Help Improve Giant Miscanthus
Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass … and Environmental Research under Award Number DE-SC0018420. The work conducted by the U.S. Department of Energy …
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Large-scale genomic analyses with machine learning uncover predictive patterns associated with fungal phytopathogenic lifestyles and traits
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Enlarging Windows into Understanding Gene Functions
… four letters represents an organism’s genetic code, or genome, which underlies physical features and functions. … capability; no one else can do it in the world at this scale.” A bottleneck in the DAP-seq protocol, however, is … through multiDAP, which allows researchers to conduct comparative analyses across the genomes of multiple species …
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