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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… interactions are difficult to study in the lab. Metagenomics provides new views of these relationships.  … hosts release organic carbon. Understanding these complex symbioses between organisms feeds into a better … Then, using metagenomes and metatranscriptomes generated by the U.S. Department of Energy (DOE) Joint Genome …
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A Plant Root Atlas for Tracking Developmental Trajectories
… A collaborative team led by Geoffrey Schiebinger at the University of British … patterns in the  Arabidopsis root, profiling nearly 100,000 single root cells and combining the information with previously … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… Science group held a  JGI Engagement: Accessing Functional Genomics Capabilities Webinar inviting researchers to submit … proposal call is open year-round, but proposals submitted by July 30 will be included in the next review. “So webinars … 1.5 megabases (MB) of a synthesis, compared to 0.5 MB for a single lab.  Q:  What is the review process for submitted …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… The disease is known more commonly as Sudden Oak Death or by its acronym, SOD. Of the dozens of Phytophthora species, … was released to the public in a highly-cited 2006 publication in the journal Science . This provided a … them. Despite advances in the years since this landmark publication, SOD continued to sweep through dozens of …
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Bioenergy sorghum stem density increases threefold following internode elongation due to continued accumulation of lignified cell walls and complex regulation of genes involved in cell wall biosynthesis
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JGI@25: Solving the Mystery of the Missing Oil
… developed at Berkeley Lab. Over the next decade, the JGI’s single cell genomics and metagenomics capabilities were harnessed in …
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Identification of functional single nucleotide polymorphism of Populus trichocarpa PtrEPSP‐TF and determination of its transcriptional effect
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Exploring the loblolly pine (Pinus taeda L.) genome by BAC sequencing and Cot analysis
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High-resolution genetic mapping of allelic variants associated with cell wall chemistry in Populus
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Advancements in the application of NanoSIMS and Raman microspectroscopy to investigate the activity of microbial cells in soils
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Tracking heavy water (D2O) incorporation for identifying and sorting active microbial cells
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Exometabolomics and MSI: deconstructing how cells interact to transform their small molecule environment
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