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… The User Support Analysis group provides computational analysis for new technology development and JGI user … focus areas being genome variation, transcriptomics and epigenomics. Our work varies in scope from the development of highly customized analysis workflows for new product …

… Meta-omics datasets show that CRISPR-Cas systems determine mutualism or … The Science Within the archaeal domain, there is a group of tiny hitchhikers. These organisms are abundant and yet … interactions are difficult to study in the lab. Metagenomics provides new views of these relationships.  …

… Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. Prior to this, he served as a Research Molecular Biologist at the USDA for 12 years where he was a driving force behind the development of numerous genomic resources that fostered the widespread …

… The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to the core set of "primary metabolites"—chemical compounds shared by most … more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence …

… The Integrative Genomics Building (IGB) seen above is home to the DOE Joint … for a sustainable bioeconomy. Mission  As a U.S. Department of Energy Office of Science user facility, we provide … processed 13,700 metabolomics samples With our users, 247 publications were published   …

… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the development of novel computational tools to identify virus sequences, the design of new … in Microbiology, Université Blaise Pascal, France M.S. in Data Analysis and Modeling for Life Sciences, Université …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable … with the HudsonAlpha Institute for Biotechnology.   Publications Grimwood, J., Gordon, L., Olsen, A. et al. The …

… Metagenomic datasets could help map out microbial diversity hotspots Over … in sequencing technologies have led to an abundance of microbial genomes becoming available to the global … January 17, 2025 in Science Advances , researchers at the U.S. Department of Energy (DOE) Joint Genome …

… After studying the mechanism of action of antifungal natural products and their … deciphered function and host-symbiont interplay using metagenomics. Taking on a Research Scientist position in 2007, … learn more about the program's areas of focus, major initiatives and more.  …

… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … and the  DOE Systems Biology Knowledgebase (KBase) . Metagenomics is the study of the microbial communities in the … Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed …

… Scientists have discovered that the candidate bioenergy feedstock switchgrass has adapted to expand … A collaborative team led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for … More genome copies in switchgrass leads to increased climate flexibility …

… which specializes in genome improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led a … resource like this important to the field of plant genetics/genomics? Avinash: Having a better handle on the gene …