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2021 JGI Proposal Call Brings New Investigators into Community Science Program
… Brassicales Genome Initiative. Brassicales is represented by more than 4,700 species, and the proposal focuses on … of Rutgers University is interested in understanding how unicellular red algae (Cyanidiophyceae) have adapted thrive in … State University is interested in developing mutant populations of the bioenergy feedstock crop  Camelina sativa …
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Picking Up Threads of Cotton Genomics
… crops. Additionally, cotton is almost entirely made up of cellulose and it is a fiber model to understand the … field, growers can easily distinguish the cotton species by traits such as flower color, plant height, or fiber … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… Survey of Setaria's natural diversity reveals seed dispersal in wild populations for the first time. For years, Elizabeth (Toby) Kellogg and other researchers at the Danforth Plant … has become a national and international leader in genetics and genomics research and biotech education and …
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Population genomics provides insights into the genetic basis of adaptive evolution in the mushroom-forming fungus Lentinula edodes
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Genetic mapping and prediction of flowering time and plant height in a maize Stiff Stalk MAGIC population
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… By leveraging new tools and large-scale data mining, JGI researchers … inside mitochondria, the energy-producing structures within cells. This is the largest dataset of its kind ever … for studying how fungi produce and manage energy at the cellular level. Because the annotations are standardized and …
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Natural soil microbes alter flowering phenology and the intensity of selection on flowering time in a wild Arabidopsis relative
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DOE Metrics
… FY 2026 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal  … Quarter Total Bases (Billions) Total Bases (Billions) by Platform Operating Hours* Goal  Actual Total*   Actual % … Quarter Total Bases (Billions) Total Bases (Billions) by Platform Operating Hours** Goal  Actual Total*   Actual % …
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How to Submit Sequencing Samples
… the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing sample-level reports and … 1) Review JGI sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been …
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Toward a Standards-Compliant Genomic and Metagenomic Publication Record
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A roadmap for equitable reuse of public microbiome data
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A Plant Root Atlas for Tracking Developmental Trajectories
… A collaborative team led by Geoffrey Schiebinger at the University of British Columbia, Philip Benfey … the  Arabidopsis root, profiling nearly 100,000 single root cells and combining the information with previously … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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