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Functional genomic screening in Komagataella phaffii enabled by high-activity CRISPR-Cas9 library
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Covariation of hot spring geochemistry with microbial genomic diversity, function, and evolution
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Generation of Transcript Assemblies and Identification of Single Nucleotide Polymorphisms from Seven Lowland and Upland Cultivars of Switchgrass
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How Filamentous Fungi Sense Food
… Tracing gene regulatory networks in the model fungus  Neurospora crassa . The Science A team led by researchers at the … We acknowledge the use of deletion strains generated by Grant P01 GM-068087 “Functional Analysis of a Model Filamentous Fungus” and that …
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JGI Advisory Committees Code of Conduct
… Guiding Principles All staff members of the US Department of Energy (DOE) Joint … Fagnan, Chief Informatics Officer Len Pennacchio, Deputy of Genomic Technologies Axel Visel, Deputy for Science Programs …
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A Collaboration to Improve Plant Genome Annotations Across Species
… To provide broad plant genomic capabilities, the DOE Joint Genome Institute … Atlas and PPRD could help with understanding gene functional roles, but the experimental inconsistency makes …
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… Streamlined genome with precise gene targeting transforms oil-producing alga into a powerful … relationships than other algae, Auxenochlorella ’s reduced genomic complexity can accelerate the design-build-test … This work was supported by the Department of Energy (DOE) Office of …
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Expression of Aspergillus niger CAZymes is determined by compositional changes in wheat straw generated by hydrothermal or ionic liquid pretreatments
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Endogenous short RNAs generated by Dicer 2 and RNA-dependent RNA polymerase 1 regulate mRNAs in the basal fungus Mucor circinelloides
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Doubling Down on Known Protein Families
… Using a novel computational approach, researchers confirm … Oct. 11, 2023 in  Nature highlights the vast array of functional diversity of microbes through a novel approach to … replicating a whole community is impossible.  Metagenomic sequencing allows researchers to study the entire …
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Functional and genomic diversity of methylotrophic Rhodocyclaceae: description of Methyloversatilis discipulorum sp. nov.
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The contributions from the progenitor genomes of the mesopolyploid Brassiceae are evolutionarily distinct but functionally compatible
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