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Extensive Reorganization of the Plastid Genome of Trifolium subterraneum (Fabaceae) Is Associated with Numerous Repeated Sequences and Novel DNA Insertions
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… revisiting a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental challenges.   Usually, plants have the upper hand against any kind of biomass …
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Mutations in the predicted DNA polymerase subunit POLD3 result in more rapid flowering of Brachypodium distachyon
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From Competition to Cooperation
… symbiotic lifestyles across multiple fungal lineages. The Science By comparing 135 fungal sequenced genomes, … evolved to establish symbiotic relationships with plants (mycorrhizae), and particularly how fungi that feed … of mutualistic forest-dwelling fungi … Datasets … From our partners …
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JGI@25: Strengthening Soybean
… revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental … explain why soybean is a flagship genome of the JGI’s Plant Program.    While soybean has desirable properties as …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… of years, underground fungi have lived in symbiosis with plant roots. Plants provide photosynthesized carbon, while … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … generate from carbon dioxide they take in. In this way, encouraging this symbiosis could improve the way soils store …
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Building Sphagnum Genomic Resources
… insights on their potential carbon cycling impact.   The Science Enabled by the JGI’s Community Science Program (CSP), researchers are developing a number of resources to build up Sphagnum as a plant model system focused … In addition, this work reflects a collaboration between two programs within different Divisions of the Office of …
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Metabolomics Technology Group
Our lab is using mass spectrometry based metabolite profiling to provide direct biochemical datasets to improve our understanding of microbial metabolism. Of particular …
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A Complex Confection Decoded: Sugarcane Reference Genome
… can work toward advancing sugarcane biotechnology. The Science Considered the world’s most harvested crop by … protect other crops facing similar pathogens. Summary Many plants, sugarcane included, are polyploid and have multiple … cultivar R570 has been generated and  reported in the journal  Nature . The work led by researchers at Australia’s …
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The Impact of Genome Analyses on Our Understanding of Ammonia-Oxidizing Bacteria*
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… (MBIB) Division, and Energy Storage & Distributed Resources Division at Berkeley Lab.  Building on the momentum … from UDE familiarized themselves with the research programs and user facilities at Berkeley Lab. Commenting on … single cell and systems biology, omics, and big data science, machine learning for experimental science, energy …
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Trent Northen
… has had leadership roles within large DOE-funded research programs using mass spectrometry for energy and … ecosystems (EcoFABs). … Trent Northen is the Metabolomics Science Program Head at the JGI. Click to learn more about … (16), 567–571 (2019) doi: 10.1038/s41592-019-0465-0. Couradeau E et al. Probing the active fraction of soil …
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