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An Integrated Dataset to Understand Ecosystem Interaction
… the dynamic relationship between poplar trees and their microbial partners. The Science To help better understand how ecosystems work and … trees. The data set generated is 25 terabytes in size. Resources for genomic sequencing, analysis and characterization … was sponsored by the U.S. Department of Energy, Office of Science, Biological and Environmental Research. Oak Ridge …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… Analysis reveals the microbial community involved in a bioremediation effort. The Science In 1999, the Environmental Protection Agency … populations rely heavily on groundwater as their only source of clean drinking water. Over 90% of the PCE in the … support was provided by the National Center for Research Resources (NCRR) (5P20RR016480-12) and the National Institute …
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Disclaimer
… Energy Joint Genome Institute is supported by the Office of Science of the U.S. Department of Energy under Contract No. …
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How to Target a Microbial Needle within a Community Haystack
… microbes from complex environmental samples. The Science A team led by researchers at the Max Planck … strides in generating genome sequences for members of the microbial world through bulk community sequencing … DNA could be sequenced. Their protocol,  detailed in the journal  Microbiome , combines multiple techniques and was …
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JGI Pitches 2022 Visiting Faculty Program Collaborations
… Faculty interested in developing proposals with JGI and Biosciences Area researchers should contact David Gilbert …
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Microbial Genomics & Metagenomics (MGM) Workshop
… Genome Institute (JGI) is offering a five-day workshop on Microbial Genomics and Metagenomics. Details: mgm.jgi.doe.gov   This … is designed to familiarize users with the Integrated Microbial Genomes & Microbiomes (IMG/M) data and workflows …
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JGI Advisory Committee
… such as the User Executive Committee, the DNA Synthesis Science User Advisory Committee, the Fungal and Algal …
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Making a Lichen Together
… and alga to understand their partnership more clearly. The Science The humble lichen is a superorganism: one being that … could help inform efforts at bioengineering symbiotic microbial consortia for bioenergy crops. And because lichens … in the lichen lifestyle. The team’s results appear in  BMC Genomics . To explore the genomes, Armaleo and colleagues …
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A Model System for Perennial Grasses
… hallii genomes offer insights to drought tolerance. The Science Researchers have developed a genomic model to study … The U.S. Department of Energy (DOE) supports research programs for developing methods for converting plant biomass … of nearly a decade of work to develop genomic resources for drought tolerance in perennial grasses. The team …
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… provide insights into environmental tendencies The Science The  Metagenome Stability Diagram — a tool within the Integrated Microbial Genomes and Microbiomes (IMG/M) platform — has … is of interest to the Department of Energy (DOE) Office of Science’s Biological and Environmental Research …
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Igor Grigoriev
… National Laboratory, and an Adjunct Professor of Plant and Microbial Biology at University of California, Berkeley. He … protists to plants. In 2009, he launched the JGI Fungal Genomics program which resulted in over 2500 fungal genomes … of researchers in genome projects and organized numerous genomics workshops. …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… team has comprehensively described host-virus dynamics in a microbial mat. The Science In microbial mats, communities of microorganisms … interactions. This work,  recently published in  The ISME Journal , by contrast, relied on methods that eschew … of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported under Contract No. …
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