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Improving the Cacao Genome and Phytozome
… plant is under threat due to climate change and devastating fungal infections. That’s why Mars, Inc., a maker of … Mars, Inc.-led consortium through the Cacao Genome Database project. The genome sequence was assembled by the plant team … working to address some of the most pressing challenges of our time. For more information, please visit  …
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Cataloging the Microbes that Manage the Health of River Systems
… on river microbes in 90% of US continental watersheds. The Science In a recent Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the watersheds … be the first publicly available, river-focused microbial resource that provides information at multiple scales from …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… when it comes to breaking down tough plant fibers. The Science Walk in a temperate forest filled with Norway spruce trees, and microbial activity teems beneath your feet. Both bacteria and fungi have genes that can break … dataset was particularly important for characterizing fungal genes, because, unlike bacteria, they often carry …
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JGI User Executive Committee Expands
… of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … in finding ways to boost visibility of the CSP to encourage more plant proposals and provide feedback on … Area. He has partnered with the JGI through several user programs. He’s also bringing his fungal genetics expertise …
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MycoCosm, the JGI’s Fungal Genome Portal for Comparative Genomic and Multiomics Data Analyses
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EcoFABs: advancing microbiome science through standardized fabricated ecosystems
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Making a Lichen Together
… and alga to understand their partnership more clearly. The Science The humble lichen is a superorganism: one being that … in the lichen lifestyle. The team’s results appear in  BMC Genomics . To explore the genomes, Armaleo and colleagues worked with Igor Grigoriev, the Fungal & Algal Program lead at the US Department of Energy …
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Metabolomics
… Find more details on the instrumentation we use and our methodology for metabolite analyses.  … Read more about our submission guidelines, what you can expect from your results as well as our library standards. … Metabolite Submission Resources & Guidelines … More Resources …
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An Integrated Dataset to Understand Ecosystem Interaction
… between poplar trees and their microbial partners. The Science To help better understand how ecosystems work and … managed through human intervention. By leveraging metagenomics, scientists were able to analyze the DNA of … trees. The data set generated is 25 terabytes in size. Resources for genomic sequencing, analysis and characterization …
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Webinar: MycoCosm Tutorial
… for genome sequencing, or only “true fungi”? A(nswer): Our focus is on fungi, algae, plants, and the microbial … MycoCosm and Fungal Program pages ( https://jgi.doe.gov/our-science/science-programs/fungal-genomics/ ). You can also contact us for … working to address some of the most pressing challenges of our time. For more information, please visit  …
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Fungal genomes mining to discover novel sterol esterases and lipases as catalysts
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… bacteria function and colonize diverse environments. The Science Cyclic di-GMP (Guanine Monophosphate) is found in … in bacteria through work enabled by the JGI’s Community Science Program (CSP) . The Impact Cyclic di-GMP controls … Berkeley and the Joint Genome Institute, a DOE Office of Science User Facility, built a chemiluminescent cyclic …
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