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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… shed more light on microbial communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine … possibility of new insights across ecosystems and research teams. Even better, creating comparable data with useful and …
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Genome-wide analysis of cytochrome P450s of Trichoderma spp.: annotation and evolutionary relationships
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Supporting community annotation and user collaboration in the integrated microbial genomes (IMG) system
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Exploiting proteomic data for genome annotation and gene model validation in Aspergillus niger
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The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v.4)
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The Fast Changing Landscape of Sequencing Technologies and Their Impact on Microbial Genome Assemblies and Annotation
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MIBiG 3.0: a community-driven effort to annotate experimentally validated biosynthetic gene clusters.
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Erratum: Functional Annotation of Fibrobacter succinogenes S85 Carbohydrate Active Enzymes
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FunGAP: Fungal Genome Annotation Pipeline using evidence-based gene model evaluation.
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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
… genes. The data from that study is now used across California State University campuses for biotechnology education as part of a course-based undergraduate resource …
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JGI@25: From Life at the Extremes to Editing Genomes
Congratulations to Jennifer Doudna of the University of California (UC), Berkeley and Lawrence Berkeley National Laboratory – jointly the Nobel Prize in Chemistry with Emmanuelle Charpentier of the Max Planck Institute! … This is the first science Nobel awarded to two women, with Charpentier and Doudna bringing the total number of …
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Fungal Friends or Foes in Plant Roots
… genomes of fungi that colonize Arabidopsis thaliana roots with genomes from other plant-associated fungi. Their … health and diversity, which can in turn boost yields for both food and for candidate bioenergy feedstock crops. … Plant Breeding Research (MPIPZ) studied how fungi associate with roots in A. thaliana plants. The work also involved …
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