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Marine Microbe Contains Multitudes
Pacific Subtropical Gyre, microbes tend to stay localized at different depths. But SAR324 can be found throughout the water column, from the warm, well-lit surface, to the … Now, a recent study published in Microbiome has uncovered that SAR324 encompasses four subgroups, adapted to different …
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EcoFAB 2025: Advancing Mechanistic Microbial Science Using Fabricated Ecosystems
Register here Book your stay at the conference venue This inaugural event will bring … and disciplines who are developing and applying laboratory ecosystems to help transition microbiome science from largely observational to reproducible mechanistic studies.  This …
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2022 Progress Report
Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is home to the DOE … from the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab Biosciences Area …
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Building Sphagnum Genomic Resources
Sphagnome data would enable researchers’ insights on their potential … as a plant model system focused on carbon cycling studies, rather than for food or fuel applications. The Impact Sphagnum’s impact on global carbon …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
Internship Program was brimming with excitement and determination as they came onsite. From data carpentry to science communications, their schedules … interning at the JGI has been the ability to sort of step back from my typical work and sort of jump feet first into …
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Enlarging Windows into Understanding Gene Functions
JGI innovates protocol revealing how genetic variations in sequences affect traits. In a text file, the rows … and G appearing over and over in a dizzying array of combinations, are unremarkable, save perhaps for the absence of …
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Game On: High School Students Drive Everglades Metagenomics Study
In late June, Kathleen Lail, a member of JGI’s Sample Management Group, attended a conference in Florida to discuss a JGI pilot … are preparing for their senior year, they will have to come back together as the paper goes through additional review …
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Scaling Up Existing Skill Sets
UC Merced students with seven JGI researchers for bioinformatics internship opportunities in fields ranging from … the JGI has really motivated me to think outside of simply looking for jobs/postdocs in industry or academia. It was … to reach out to anyone in the Institute to get feedback and insights on the project and everyone’s willingness …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… to the naked eye, microscopy reveals unexpected complexity At first glance, the slightly murky waters in the tube look like a scoop of stormwater, complete … research focuses on marine mangrove systems, and he was looking for sulfur-oxidizing symbionts in sulfur-rich …
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Uncovering Novel Genomes from Earth’s Microbiomes
Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … over 500,000 existing genomes available at that time. “Looking across the tree of life, it’s striking how many …
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Doubling Down on Known Protein Families
Using a novel computational approach, researchers confirm microbial diversity is … room with a flashlight, only able to clearly identify what falls within that single beam. When it comes to microbial … approach to better understand microbial communities by looking at protein function within them. The work was led by …
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Triggering Morel Fruiting
A collaborative team led by Hao Tan from the Sichuan Academy of … in China and involving Francis Martin from the Institut National de la Recherche Agronomique (INRA) in France and … Fungal Genomes Project, which aims to provide genomic information for every family of fungi. In the following guest …
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