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A metagenomic perspective on the microbial prokaryotic genome census
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A single-cell genomics pipeline for environmental microbial eukaryotes
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Genetics of mating in members of the Chaetomiaceae as revealed by experimental and genomic characterization of reproduction in Myceliophthora heterothallica
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Genome sequence of the moderately thermophilic halophile Flexistipes sinusarabici strain (MAS10T)
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JGI@25: Roots of a Mutualist Relationship
In honor of the JGI's 25th anniversary in 2022, we have revisited a … energy and environmental challenges. In March 2008, the genome sequence of the forest fungus Laccaria bicolor was … a symbiotic relationship with the poplar, a JGI Flagship Genome and the first tree to have its genome sequenced. …
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Single-cell genomics for the masses
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Emiley Eloe-Fadrosh
… joined the JGI in 2014 to pursue her research interests in microbial ecology and metagenomics. Her current research … training in human microbiome research at the Institute for Genome Sciences at the University of Maryland School of … She stepped into the Metagenome Program Lead position in 2017. She also leads the DOE’s multi-lab National Microbiome …
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A Grass Model to Help Improve Giant Miscanthus
Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass … accessions and RAD-seq work was supported by EU FP7 KBBE.2011.3.1-02, grant number 289461 (GrassMargins) and …
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SIPs with Standards
Isotope Probing (SIP) is a powerful technique for studying microbial communities. These experiments can show which … SIP labwork and analysis can be very demanding.  The JGI offers SIP analysis to make these experiments accessible to … that can be useful to multiple teams and analyses. This episode, Rex Malmstrom (JGI), and Roli Wilhelm (Purdue …
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Learning to Look
… by scientists at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … a computer could use to conduct a similar type of search in microbial and metagenomic databases. In this case, the … the algorithm, the search tool combed through more than 70,000 microbial and metagenome datasets, ultimately …
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national … at Lawrence Berkeley National Laboratory. The JGI consists of around 280 researchers and support staff in the …
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A One-Stop Shop for Analyzing Algal Genomes
… data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one place where you can … tools created by JGI researchers, including the Integrated Microbial Genomes and Microbiomes (IMG/M) system for …
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