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User Advisory Committees
… All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s (Berkeley Lab’s) core values, which guide the relationships we nurture in our workplace and seek to establish … providing input and advice on JGI policies and practices that affect users and their science including technical …
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Matt Blow
… Dr. Blow joined the JGI in 2009, and currently heads the Genome Analysis group. In this role he supervises the Genome Assembly, QA/QC, and User Support Analysis teams. … and cancer genetics. Dr. Blow carried out postdoctoral work at LBNL, where he worked on computational and experimental …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… Large-scale comparative analysis leads to identification of biosynthetic gene … metabolites for multiple applications. The planet’s microbial diversity is immense, yet much of it remains … collaborated with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Bacterial response to the 2021 Orange County, California, oil spill was episodic but subtle relative to natural fluctuations.
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Viral dynamics in a high-rate algal pond reveals a burst of Phycodnaviridae diversity correlated with episodic algal mortality
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Genome Sequence of Oceanicola sp. Strain MCTG156(1a), Isolated from a Scottish Coastal Phytoplankton Net Sample
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Publication Policy
… The purpose of this policy is to establish communication norms around JGI contributions, ensure that all contributors to a research project are appropriately … assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators, and JGI …
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… single-molecule, long-read DNA sequences to aid with genome assembly and transcriptome analysis of microbial, fungal, and plant research projects.  More … by JGI and uploaded to IMG? A:  Depending on the project setup, we can include as part of our data analysis plan …
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Special Initiatives & Programs
… and products . A minimum request of 1 Tb of sequence data is required to qualify for BERSS. For DNA synthesis … requests, the minimum is 100 kb, and for metabolomics, at least 22 samples are required. If your proposed request … CSP Large Scale call .  Process Proposals may be submitted at any time. Support is limited to work included in the …
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The JGI announces FY25 awardees for our Community Science Program Annual Call
… Call. These projects include cutting-edge research into microbial communities — from freshwater estuaries reshaped by dam removal to Antarctica’s photosynthetic mats — to reveal how these systems adapt and contribute to …
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Webinar: MycoCosm Tutorial
… data portal , an interactive collection of sequenced fungal genomes, omics data and comparative analysis tools. … A(nswer): Our focus is on fungi, algae, plants, and the microbial world but we also annotated several Phytophthora … from another JGI portal, IMG:  https://img.jgi.doe.gov 7.  Q: And what about myxomycetes (Amoebozoa), would you …
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Data Ecosystem
… new capabilities and resources to users through a BER data ecosystem.  A data ecosystem is a connected resource where data from different organizations is discoverable and … access to both expertise and infrastructure to facilitate these efforts. Particular areas of emphasis will be the …
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