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The GreenCut2 Resource, a Phylogenomically Derived Inventory of Proteins Specific to the Plant Lineage*
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Genome analysis of the marine bacterium Kiloniella laminariae and first insights into comparative genomics with related Kiloniella species
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Genomic Analysis of “Elusimicrobium minutum,” the First Cultivated Representative of the Phylum “Elusimicrobia” (Formerly Termite Group 1)▿ †
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The first two chromosome‐scale genome assemblies of American hazelnut enable comparative genomic analysis of the genus Corylus
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Consensus statement from the first RdRp Summit: advancing RNA virus discovery at scale across communities
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The Surprising Structure of a Shrub Willow Sex Chromosome
… is characteristic of the sex chromosomes of mammals is, for the first time, seen in a plant. The Science Sex in plants can … by the NSF Dimensions of Biodiversity Program (DEB-1542509 to S.D., DEB-1542486 to LBS, and DEB-1542599 to …
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Taking Stock of the Known and Unknown Microbial Space
… the current state of microbial genomic biodiversity. Using publicly available genome sequence data generated over the … the microbial diversity we know about, and proposes a path forward to curate and cultivate what is still unknown.  “We … much of their diversity we've actually captured,” said co-first author Dongying Wu, a member of the Functional …
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A Collaboration to Improve Plant Genome Annotations Across Species
Manager Sarah Sharman recently interviewed study first author Avinash Sreedasyam, a HudsonAlpha senior … JGI Plant Gene Atlas is a huge updateable transcriptome resource spanning diverse plant species. It was developed to … or do you have to be a subscriber? Avinash: It has been publicly available since 2018. There were more than 15 …
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Protocols
… protocols provided by JGI and the JGI user community below for DNA preparation tools, high molecular-weight DNA … can be found here . DNA Extraction Protocols: … Tips for High Molecular Weight DNA extraction: … RNA Extraction …
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Searching for fat tails in CRISPR-Cas systems: Data analysis and mathematical modeling
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
Puerto Nuevo is a small town along the Baja California coastline in Mexico. While conducting early field … alumnus of the JGI-UC Merced Genomics Internship Program, first sampled the area in summer 2016.  She described the … UC Merced graduate students who participated in the Summer 2015 research experience at the JGI as part of an education …
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Insights into Secondary Metabolism from a Global Analysis of Prokaryotic Biosynthetic Gene Clusters
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