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Obtaining genomes from uncultivated environmental microorganisms using FACS–based single-cell genomics
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Comparative genomics reveals a dynamic genome evolution in the ectomycorrhizal milk‐cap (Lactarius) mushrooms
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Comparative genomics reveals dynamic genome evolution in host specialist ectomycorrhizal fungi
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Comparative genomics of Coniophora olivacea reveals different patterns of genome expansion in Boletales
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Rediscovery by Whole Genome Sequencing: Classical Mutations and Genome Polymorphisms in Neurospora crassa
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MycoCosm, the JGI’s Fungal Genome Portal for Comparative Genomic and Multiomics Data Analyses
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Protocol for single-cell isolation and genome amplification of environmental microbial eukaryotes for genomic analysis
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A second special issue of Standards In Genomic Sciences from the Genomic Standards Consortium
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JGIota: A Tool to Find the Nomadic Genes that Help Microbes Adapt - geNomad
… software that finds plasmids and viruses within microbial genomes. As mobile genetic elements like viruses spread …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… crop. In 2018, the JGI had sequenced and assembled the genomes of two varieties of a close relative and model … switchgrass has become an important species whose complex genomes are helping breeders understand how they can boost …
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Special Initiatives & Programs
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Frequently Asked Questions: Project Management
IMG (citation: https://doi.org/10.1093/nar/gkaa939 ) Metagenomes and Single Cells: IMG/M   (citation: … are available for functional annotation/curation of your genomes Microbial (IMG–ER) Metagenome and Single Cell (IMG/ …
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