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… the latest interactive version of the JGI’s plant data portal. On August 6, 2021,  version 12 of Phytozome … the genome browsers, gene pages, search, BLAST and BioMart data warehouse interfaces they have come to rely on from … and there are now much more powerful and flexible tools available for building high performance user …

… a postdoc and went to industry to see what they had, what data they had. DAN UDWARY: And they had a lot of data for the time, right? BRIAN BACHMANN: For the time. … an undergraduate and not succeeding and still using all the tools from mechanistic enzymology to natural product …

… and I’m really excited about it. Because now we have the tools through genomics, and metabolomics, to ask these … for a company. Personally, that was my first taste of big data if you want, maybe it’s medium data now. But at the time, it was big data. And yeah, trying …

… so starting from some of the enzymes that we had the most data on and knew the most about, working with my … You can really design your experiments in a way that’s data rich, and you can really just learn so much, which then … with. DAN UDWARY: Yeah. ALISON NARAYAN: And there are other tools that I think are really useful, that again are set up …

… created by researchers under the direction of Microbiome Data Science Group Lead Nikos Kyrpides at the U.S. … geNomad is now accessible through the National Microbiome Data Collaborative’s EDGE platform. The Impact In order to … for identifying viruses and plasmids. Until now, most other tools have focused on identifying only specific plasmids or …

… cells of the uncultivated SAR324. The constellation of data gave the team unprecedented resolution to study the … also processed using the JGI-developed software suite, BBTools , and relying on the JGI Integrated Microbial Genomes … SAR324 on IMG/M Data portal … tools designed for analysis of DNA and RNA sequence data.  …

… — JGI researchers and collaborators work to create FAIR datasets to maximize returns on these advances. Over the … which microbes are present in a sample, to generate data about which organisms are active, and which microbes … out the onerous SIP sample processing. Generating these datasets opens up the possibility of new insights across …