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Comparative transcriptomics as a guide to natural product discovery and biosynthetic gene cluster functionality
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Genomics discovery of giant fungal viruses from subsurface oceanic crustal fluids
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… available through the  Community Science Program (CSP) . This includes mass spectrometry-based measurements of … A:  It depends on the soil. Typically soils that have a high clay content are not well suited for metabolomics … .  Q:  Is it possible to use these same techniques in drug discovery and synthesis from medicinal plants? If yes, we …
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Simon Roux
… and virus-host interactions in microbial systems. Through a 2021 DOE Early Career Research Program, Dr. Roux established … and activity is driven by snowmelt and host dynamics in a high-altitude watershed soil ecosystem. Microbiome 11, 237 … and bacteria. PLoS Biology 21, e3002083 Roux et al., 2021. Ecology and molecular targets of hypermutation in the …
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Susannah Tringe Named 2020 DOE Lawrence Award Recipient
… the 2020 Ernest Orlando Lawrence Award , one of DOE’s highest honors! Tringe, a microbiologist, was recognized for … Systems group. The award ceremony was held January 19, 2021. Learn more here in the Berkeley Lab story.   …
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From Competition to Cooperation
… For example, the number of plant cell wall-degrading enzymes such as ligninases and cellulases were much lower in … the framework of the Mycorrhizal Genomics Initiative (CSP # 305), Metatranscriptomics of Forest Soil Ecosystems project (CSP # 570) and the 1000 Fungal Genome projects (CSP # 662 & …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… of developing alternative fuels from plants is the high cost and resource requirements of processing these sturdy materials, rumen microbes and their enzymes are an optimal study subject that could lead to more … You can learn more about how JGI data supports higher education in this JGIota , a Genome Insider podcast …
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The Power of One, Amplified
… BC Parks). In these springs, temperatures can reach as high as 80°C (~190°F), yet microbes thrive here. The … more moderate ecosystems. A few years ago, a candidate bacterial lineage was identified from microbial and … more ideas, similar to the sharing of genes within a highly recombining microbial population. This work showcases …
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
… awarded the van Niel International Prize for Studies in Bacterial Systematics for the triennium 2017-2020! …
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Revealing enzyme functional architecture via high-throughput microfluidic enzyme kinetics
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High resolution mapping reveals hotspots and sex-biased recombination in Populus trichocarpa.
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Highly diverse and unknown viruses may enhance Antarctic endoliths’ adaptability
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