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… Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of … enabled in part through  JGI’s  Community Science Program (CSP) , as several approved proposals have contributed toward … in correctly predicting plant pathogens (blue) vs saprobes (green). (From Haridas S et al.  Studies in Mycology , 2020.) …

… she has continued to contribute across JGI plant genomes. She has appeared on the annual Highly Cited … release of the high quality reference genome sequence of green millet ( Setaria viridis ). The team of researchers at … the first time. A 2020 Nature Genetics paper describing the genomes of the five major cotton lineages. Grimwood was also …

… 1% by citations for papers published and cited between 2008-2018.” Less than 6,300 Highly Cited science and social … a long-term project to sequence, annotate and analyze the genomes of more than 300 Aspergillus Go here to learn more …

… National Microbiome Data Collaborative (NMDC) to produce open metagenomics data. Taking the JGI’s call for … of sequence. “We are thrilled to support this year’s CSP awardees as they embark on ambitious projects that span … research community. See below for the full list of 2026 CSP Large Scale Call recipients.    …

… have fully decoded the genome of an oil-producing green alga, and demonstrated precise gene targeting in the … Finding that "essential" genes can be deleted opens new engineering possibilities. The rapid evolution … to understand how genes with unusual structures work in green algae. The genome is remarkably simple with only 7,500 …

… of organisms and ecosystems. These kinds of data could open opportunities along multiple avenues, including … path, has previously proven successful; in the 2018-2023 five-year strategic plan, the JGI accomplished 90% … the bioeconomy. Functional diversity theme. Reading the genomes of individual organisms or environmental DNA, and …

… called natural products . Yet, combing through the genomes of four anaerobic fungal species has revealed, for … and Piromyces finnis . In work reported in 2017, the fungal genomes were sequenced by the U.S. Department of Energy … Integrating Collaborations for User Science (FICUS) initiative, which allows researchers to more easily …

… an uncultured bacterial single cell – a symbiont of the green sharpshooter. In 2012, single cells isolated from the … The single cell was isolated from the bacteriome of the green sharpshooter Draeculacephala minerva bacteriome, … identify, and characterize more than 200 microbial genomes that were mapped to nearly 30 major previously …

… that could prove fruitful for saving Citrus from greening disease. You’ve probably never heard of trifoliate … resists a disease ravaging citrus groves: citrus greening. From 2012 to 2016, in Florida alone this disease … understand how trifoliate orange is able to resist citrus greening disease, which causes fruit to go unripened and a …

… Biology Division of the Lab’s Biosciences Area since 2018. Woyke also holds appointments as Adjunct Scientist at … genetic material of uncultivated microbes and link their genomes to the roles they play in the environment. One … in Nature , applied single-cell sequencing to decode genomes of bacteria and archaea from previously understudied …

… plant host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots with genomes from other plant-associated fungi. Their analysis … work was partly enabled by a JGI Community Science Program (CSP) proposal led by INRAE’s Francis Martin that contributed …