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JGI@25: Using Team Science to Build Communities Around Data
… of reference genomes for fungal metagenomics. Two more CSP proposals came in 2016 that would complement these … to evolution of genomic mechanisms — resulting in the diversity of fungal phenotypes and a myriad of ecologies.” … The Open Green Genomes Initiative is the product of a 2018 Community Science Program proposal from James …
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Building Sphagnum Genomic Resources
The Science Enabled by the JGI’s Community Science Program (CSP), researchers are developing a number of resources to … the ecosystem response to climate change. Through the CSP, researchers are aiming to have two high quality … seven novel species of Acidobacteria through an approved CSP proposal. The researchers found that these species …
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Data Ecosystem
… partner in enabling systems biology analyses, such as metabolic modeling, that go well beyond genome annotation …
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Novel soil bacteria possess diverse genes for secondary metabolite biosynthesis
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Natural Prodcast Episode 19: Bill Fenical
… it took 15 to 18 years before we were able to convince the diversity of marine ecologists that they needed to consider …
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Frederik Schulz
… protists. These approaches enable novel insights into the diversity and important ecological roles of microeukaryotes … binning of a giant virus. mSystems. 5 (3) Schulz et al. (2018) Hidden diversity of soil giant viruses. Nature Communications. 9 (1), 1-9 Roux et al. (2018) Minimum Information about an Uncultivated Virus Genome …
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A sorghum genome-wide association study (GWAS) identifies a WRKY transcription factor as a candidate gene underlying sugarcane aphid (Melanaphis sacchari) resistance
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Simon Roux
… focused around developing foundational knowledge of viral diversity and virus-host interactions in microbial systems. … microbiome. Nature Communications 12, 3076. Roux et al., 2018. Minimum Information about an Uncultivated Virus Genome … Researcher (Cross-field), 2020 LBNL Early Career LDRD, 2018 Senior Editor: Microbiology Resource Announcements … …
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Shared Genomic Regions Between Derivatives of a Large Segregating Population of Maize Identified Using Bulked Segregant Analysis Sequencing and Traditional Linkage Analysis
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Functional Genomics of Novel Secondary Metabolites from Diverse Cyanobacteria Using Untargeted Metabolomics
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Analyses of expressed sequence tags from the maize foliar pathogen Cercospora zeae-maydis identify novel genes expressed during vegetative, infectious, and reproductive growth
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Uncovering Novel Genomes from Earth’s Microbiomes
… genomes for just a small fraction of Earth’s microbial diversity. Because most microbes cannot be cultivated under … designed for biologists and bioinformaticians, developed metabolic models for thousands of MAGs. The models are now … , which provides shareable, reproducible workflows. “Metabolic modeling is a routine analysis for isolate …
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