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Webinar: MycoCosm Tutorial
… data portal , an interactive collection of sequenced fungal genomes, omics data and comparative analysis tools. … in metagenomes? A: Search in metagenomes is available from another JGI portal, IMG:  https://img.jgi.doe.gov 7.  … process, etc. We do not just sequence but deliver a complete package including standard bioinformatics analyses. …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… nearly 10,000 new annotations of fungal mitochondrial genomes — the DNA found inside mitochondria, the … all fungi, and found that some of these genes have moved from the mitochondria into the nuclear genome over … three independent gene-prediction methods to produce more complete gene models. The JGI workflow consistently …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… species? Or, do they tend to specialize, infecting just a single host? Another wrinkle in the mystery is that viruses … their host indefinitely. Now, in studying a microbial mat from Cone Pool in Mono County, California, scientists have … virus had been infecting the cell. The team assembled 130 genomes from their sample — a small proportion of the …
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Webinar: PhycoCosm Tutorial
… data portal , an interactive collection of sequenced algal genomes, omics data and comparative analysis tools. … and Answers 1.  Q(uestion): Why would your Tree ever differ from NCBI Taxonomy? A(nswer): If you find that our trees are … publish the data sets the trees are based upon? A: This is still work in progress as new genomes are being added. We do …
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Reconstructing each cell's genome within complex microbial communities—dream or reality?
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Genome size, cell size, and the evolution of enucleated erythrocytes in attenuate salamanders
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A More Intuitive Phytozome Interface
… website. Since May 2019, v12 has not had any additional genomes added to it, nor had any feature updates. Phytozome  … BioMart data warehouse interfaces they have come to rely on from Phytozome, with a more intuitive interface, deployed on … implementation of the InterMine data warehouse, is still available in v13. However, the genomes included in …
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Massive lateral transfer of genes encoding plant cell wall-degrading enzymes to the mycoparasitic fungus Trichoderma from its plant-associated hosts
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Nandita Nath
… in developing new methods to improve genome recovery from single cells and to build sequencing libraries from minimal DNA …
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A Single Residue Switch Controls Isomer Selectivity in the Myxobacterial Isobonnadiene Synthase
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The first complete human genome
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A near complete snapshot of the Zea mays seedling transcriptome revealed from ultra-deep sequencing
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