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Cataloging the Microbes that Manage the Health of River Systems
… on river microbes in 90% of US continental watersheds. The Science In a recent Nature paper , researchers describe a … points to the information. The team harnessed a community-science program to collect samples from across the country … the microbiology of watershed systems, they utilized over 160 river water samples collected through WHONDRS, a …
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Fungal Friends or Foes in Plant Roots
… and fungi that can help or harm plant host health. The Science Researchers compared the genomes of fungi that … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … Control (CBC). The Austrian Science Fund FWF project P30460-B32 is acknowledged for funding L.A. … Arabidopsis …
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You Can Move, But You Can’t Hide
… mobile genetic elements like plasmids and viruses. The Science Mobile genetic elements (MGEs) are genetic entities … by researchers under the direction of Microbiome Data Science Group Lead Nikos Kyrpides at the U.S. Department of … to L.A.N.L., DE-AC05-00OR22725 to O.R.N.L., DEAC05-76RL01830 to P.N.N.L.), and used computational resources from …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… community involved in a bioremediation effort. The Science In 1999, the Environmental Protection Agency … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … to understand the ERD process.  … The work (proposal:  10.46936/10.25585/60000717 ) conducted by the U.S. Department of …
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A One-Stop Shop for Analyzing Algal Genomes
… to freely investigate the genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … Efficiency and Renewable Energy under Agreements NL0032266. Funding for open access charge: DOE [DE-AC02-05CH11231]. …
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Ancient Algae Reveal Secrets of Plant Evolution
… genetic foundations that helped plants conquer land over 600 million years ago. The Science By studying the genes of land plants’ closest algal … drive a strong bioeconomy. Summary Through the Community Science Program of the U.S. Department of Energy (DOE) Joint …
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Effects of Polar Light Cycle on Microbial Food Web
… lake microbial communities change with the seasons. The Science Light-harvesting bacteria (phototrophs) in … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … (Berkeley Lab). The work was enabled by the JGI’s Community Science Program. For most months each year, Ace Lake is …
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A One-Stop Shop for Analyzing Algal Genomes
… to freely investigate the genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … and Kuo recommend they apply through the JGI’s Community Science Program . …
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Model Fern Reveals Insight into DNA Thievery in Ferns
Open Green Genomes hits milestone with C. richardii The Science Fern genomes are huge, and incredibly complex — … following a genome duplication event that occured some 60 million years ago. Massive gene loss, rampant gene … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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An Automated Tool for Assessing Virus Data Quality
… assess virus sequence fragments and data quality. The Science Through advances in sequencing technologies and … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … on open ocean samples. CheckV identified a total of 44,652 complete or near-complete viral genomes across both …
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Marine Microbe Contains Multitudes
… ecologically distinct groups with different lifestyles. The Science The bacterium SAR324 is unusually cosmopolitan. In … and colleagues set sail on research cruises in 2015 and 2016. At Station ALOHA , site of the 30-years-long Hawaii Ocean … of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… the program’s inception. In 2014, JGI’s Zhong Wang and Science Programs Deputy Axel Visel teamed with University of … students summer research experience at the JGI. On July 26, 2018, the JGI celebrated the culmination of the fifth … the event and shared updates. Here are a few of the highlights: Mario Banuelos (2017 graduate intern): Assistant …
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