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JGI@25: Following Fungi that Pry Apart Plant Polymers
Over the last year, we’ve been revisiting a number of notable achievements that showcase our collaborations and … O’Malley, a chemical and biological engineer at the University of California Santa Barbara. So plants don’t break down without …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine Learning — JGI … (SIP) has opened vast windows into specific activities catalyzed by microbial communities. By pairing RNA or DNA … Pacific Northwest National Laboratory, Northern Arizona University, Argonne National Laboratory and the JGI.  With …
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DOE JGI Interns Share Their Summer Experiences
… the DOE JGI hosted 10 interns who came from a wide range of backgrounds. Many of them spent the summer crunching … Cristhian Gutierrez and Bryan Rangel Alvarez are both  California Alliance for Minority Participation (CAMP) … photos of the interns. For this second year of the DOE JGI/University of California, Merced Genomics Distinguished …
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Eelgrass Proves to Be Much Younger Than We Thought
… less than previously believed.  The Science Eelgrass, one of the most abundant plants in the ocean, originated in … growing off the coasts of Alaska and Norway, as well as California and Mexico. Based on the study, it would seem … Alaska.  Upon its arrival in Alaska, eelgrass quickly relocated to the Atlantic ocean through the Bering strait, which …
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Polar Phytoplankton Need Zinc to Cope with the Cold
Antarctic algae need their vitamins; zinc fuels some of their most important functions. Even in the chilly waters … Thomas Mock, a marine microbiologist at the University of East Anglia, leads this effort to understand … Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley …
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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature … watershed scale models to manage river ecosystems. One application for the information is the development of river … Through the JGI’s Community Science Program, Colorado State University researchers led a consortium to study river …
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JGI Launches Latest Strategic Plan
For the Joint Genome Institute, the end of 2018 was marked by a celebration of contributing over one … history. In 2019, the countdown has begun to the June dedication event of the Integrative Genomics Building—the new … scores of individuals, including JGI staff, Biosciences and Berkeley Lab leadership, the half-dozen JGI advisory …
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JGI@25: Solving the Mystery of the Missing Oil
In honor of the JGI's 25th anniversary in 2022, we have revisited a … Lab environmental biologist and current holder of the University of Tennessee-Oak Ridge National Laboratory … The JGI’s single cell genomics expertise led to the identification of a new “oil-seeking” species related to …
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Evolution of a Fungal Gene Expression Regulator
Describing the largest analysis to date of the modified DNA base 5mC variations in fungi. The … elements or transposons that can move to another location in the genome. Many plant pathogens such as the fungi … Ecology & Evolution , a team led by Robert Schmitz at the University of Georgia and including JGI researchers …
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Game On: High School Students Drive Everglades Metagenomics Study
In late June, Kathleen Lail, a member of JGI’s Sample Management Group, attended a conference in … teach a second year A-Level Advanced International Certificate of Education (AICE) Biology class at Florida’s Boca … a DOE Office of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… ( CRAGE ). CRAGE enables scientists to insert large pieces of DNA (up to 60 kb) in a single step, directly into the … enable us to assess CRAGE’s impact, including how this application could scale,” says Mouncey. The JGI team has already … example, a group of JGI users led by Steven Hallam at the University of British Columbia, recently deployed CRAGE to …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
Understanding the shared genetic toolkit of ancestral and present-day plants The Science In a recent  … Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory through the … to S. Cheng and from the URPP Evolution in Action of the University of Zurich, grants from the Swiss National Science …
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