Search

… involving academic faculty and researchers at the DOE Joint Genome Institute (JGI), a DOE Office of Science User … computational biology analysis. KBase also supports  MICROnet (Microbiomes In Computational Research Opportunities … and genomics. Fungi can be better understood through reference genomes, but unfortunately there are not many …

… be elected annually by the UEC members and will serve a one-year term in that role. Following this term, the … UEC report. Elections Elections are held annually with one-third of the seats being filled each year. Anyone can nominate, but only users active in the last fiscal …

… City. Grimwood is also co-director of the HudsonAlpha Genome Sequencing Center. Grimwood heads the Library … In 2020, she was named a Yellowhammer Woman of Impact.     Notable large-scale multi-institutional JGI projects and … to include: A 2021 Nature paper announcing a high-quality reference sequence of the complex switchgrass genome , using …

… nearly tripled the available fungal mitochondrial genome data, unlocking new potential for AI-driven studies … a widely used automated annotation tool missed at least one core gene in nearly half of those same genomes. The team first applied the workflow to a curated reference set of over 300 genomes spanning the fungal …

… guide RNA to lead it to the correct sequence to snip — but not all guides are effective. To ensure the gene editing … in  Metabolic Engineering , a team of researchers likewise honed their tool before felling their research problem: at a … included researchers at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User …

… to identify proteins, the team compiled DNA sequences (metagenomes) and messenger RNA sequences (transcriptomes) from … and metatranscriptome sequences, as well as individual reference fungal genome sequences assembled as part of its … near the roots. But the deeper down and away from the roots one goes, the more bacteria show up. The data underscore …

… collaborated with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … have been generated using techniques that the JGI has pioneered, including single-cell genomics and metagenomics. … collapsed, while these issues are not commonly seen with reference isolates. “For secondary metabolite discovery in …