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A chromosome‐scale reference genome of trifoliate orange (Poncirus trifoliata) provides insights into disease resistance, cold tolerance and genome evolution in Citrus
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Making a Lichen Together
… clearly. The Science The humble lichen is a superorganism: one being that is actually comprised of two (or more) … the ascomycetes, one of the two main branches of fungi); another is a photosynthetic microbe, tucked in the fungus’ … For the first time, a team has analyzed in parallel the genomes and transcriptomes of both partners to better …
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Open Frameworks Training the Next Generation of Scientists
… involving academic faculty and researchers at the DOE Joint Genome Institute (JGI), a DOE Office of Science User … computational biology analysis. KBase also supports  MICROnet (Microbiomes In Computational Research Opportunities … and genomics. Fungi can be better understood through reference genomes, but unfortunately there are not many …
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Multiple Maize Reference Genomes Impact the Identification of Variants by Genome‐Wide Association Study in a Diverse Inbred Panel
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User Executive Committee Charter
… be elected annually by the UEC members and will serve a one-year term in that role. Following this term, the … UEC report. Elections Elections are held annually with one-third of the seats being filled each year. Anyone can nominate, but only users active in the last fiscal …
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Fine Mapping of the Bsr1 Barley Stripe Mosaic Virus Resistance Gene in the Model Grass Brachypodium distachyon
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Jane Grimwood Named HudsonAlpha Genomics Chair
… City. Grimwood is also co-director of the HudsonAlpha Genome Sequencing Center. Grimwood heads the Library … In 2020, she was named a Yellowhammer Woman of Impact.     Notable large-scale multi-institutional JGI projects and … to include: A 2021 Nature paper announcing a high-quality reference sequence of the complex switchgrass genome , using …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… nearly tripled the available fungal mitochondrial genome data, unlocking new potential for AI-driven studies … a widely used automated annotation tool missed at least one core gene in nearly half of those same genomes. The team first applied the workflow to a curated reference set of over 300 genomes spanning the fungal …
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Better Genome Editing for Bioenergy
… guide RNA to lead it to the correct sequence to snip — but not all guides are effective. To ensure the gene editing … in  Metabolic Engineering , a team of researchers likewise honed their tool before felling their research problem: at a … included researchers at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User …
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Global Diversity of the Brachypodium Species Complex as a Resource for Genome-Wide Association Studies Demonstrated for Agronomic Traits in Response to Climate
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SECONDARY WALL ASSOCIATED MYB1 is a positive regulator of secondary cell wall thickening in Brachypodium distachyon and is not found in the Brassicaceae
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Transcriptome analysis of Brachypodium during fungal pathogen infection reveals both shared and distinct defense responses with wheat
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